Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A04
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 88 7e-19
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 84 2e-17
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 71 2e-13
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 62 4e-11
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 62 5e-11
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 58 7e-10
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 29 0.46
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 29 0.60
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 27 1.8
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 26 3.2
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 4.2
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 9.8
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 88.2 bits (209), Expect = 7e-19
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +2
Query: 14 RNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQ 193
+ +E+ IRR NN+ YGLA+GV T +++ A++ + ++AGTV+VN YN PFGG+K+
Sbjct: 413 KTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKE 472
Query: 194 SGFGKDLGQEALNEYLKTKTVTV 262
SG G++LG L Y +TK V +
Sbjct: 473 SGIGRELGSYGLTNYTQTKAVHI 495
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 83.8 bits (198), Expect = 2e-17
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 23 EDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGF 202
++ I +ANNT YGLA+ FT+D+ RA + ++ ++AG VF+N+ +D+ APFGG K SG
Sbjct: 411 DEAIEKANNTTYGLAAMCFTKDLERAHRVSDELEAGMVFINSTENSDIQAPFGGIKMSGI 470
Query: 203 GKDLGQEALNEYLKTKTVTVEY 268
G +LG + Y + K V + +
Sbjct: 471 GNELGSNGIEMYTQIKAVHINF 492
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 70.5 bits (165), Expect = 2e-13
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +2
Query: 23 EDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGF 202
++V+ AN++ GLA +F++D+SR + E + G V NT +DV +PFGG K+SGF
Sbjct: 416 DEVVAWANDSPVGLAGYLFSKDISRVFRVGEALQVGMVGCNTGLVSDVLSPFGGVKESGF 475
Query: 203 GKDLGQEALNEYLKTKTVTV 262
G++ + ++EYL K++T+
Sbjct: 476 GREGSKYGISEYLDIKSLTI 495
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 62.5 bits (145), Expect = 4e-11
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +2
Query: 5 FSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGG 184
F + E+VI AN+++ GLA VFT ++S + A+ ++ G V N + FGG
Sbjct: 405 FKFDDTEEVIEWANDSDVGLAGYVFTNNLSTMIHVAKELEVGLVGANIEMVDEPFISFGG 464
Query: 185 FKQSGFGKDLGQEALNEYLKTKTVTVE 265
KQSGFGK+ G+ + E++ K + ++
Sbjct: 465 IKQSGFGKEAGRLGVQEFMVVKEINLK 491
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 62.1 bits (144), Expect = 5e-11
Identities = 29/79 (36%), Positives = 45/79 (56%)
Frame = +2
Query: 23 EDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGF 202
E+ + AN++EYGL SGVF+ + F+ I+AG +N Y+ P+ G+K SG
Sbjct: 418 EEALELANDSEYGLGSGVFSTNPKTLEFFSNNIEAGMCSLNNYHVVTHELPWIGWKHSGL 477
Query: 203 GKDLGQEALNEYLKTKTVT 259
G L + NEY++ K +T
Sbjct: 478 GVGLSKHGYNEYMRLKQIT 496
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 58.4 bits (135), Expect = 7e-10
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 5 FSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAA-PFG 181
F +++ E + AN TE+GL + VF RD F + ++ G V VN + + PFG
Sbjct: 383 FRAKSPEHALEIANGTEFGLGASVFGRDKQLCQYFTDNLETGMVAVNDFGAFYLLQMPFG 442
Query: 182 GFKQSGFGKDLGQEALNEYLKTKTVTVE 265
G K+SG+G+ G E L +K + +
Sbjct: 443 GCKKSGYGRFAGYEGLRGICNSKAIAYD 470
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 29.1 bits (62), Expect = 0.46
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 153 LYVLTNTVPASMRSA-NCSARDTSRVNTPLARPYSVLFARRITSSMFLLLN 4
LYV + S+ S+ C+A S+ N RPYSV+ +R S F L+
Sbjct: 936 LYVYKSDATNSLASSIRCTADKISKSNFDFRRPYSVIPSRMTGRSSFTQLS 986
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.7 bits (61), Expect = 0.60
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 144 LTNTVPASMRSANCSARDTSRVNTPLARPYSVLFAR 37
+T +P+S S+N S +DT+ VN+P A +S F +
Sbjct: 1 MTFRIPSSQESSNKSEKDTT-VNSPNASSFSSFFKK 35
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 8 SSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPF 178
SS +++ I NT+ GL+S D S+ F D T+F +Y+KT+ +
Sbjct: 659 SSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLF--SYSKTETCLTY 713
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 26 DVIRRANNTEYGLASGV 76
D+I+R +TEYG+A+G+
Sbjct: 239 DIIQRKGSTEYGVAAGL 255
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 336 HSVNNNYHHGNAFYKKFCKSSHYDIHLER 422
+S+N HH N F F S+++D +R
Sbjct: 737 YSINKVVHHLNYFMNSFLSSTYFDAVKDR 765
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 250 FCFEILVQSFLAEIFPEAGLLEAAE 176
+C + L Q F+ EIF E G+ + +E
Sbjct: 1732 YCMDSLAQIFVDEIFGEVGVEKDSE 1756
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,752,829
Number of Sequences: 5004
Number of extensions: 29382
Number of successful extensions: 85
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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