Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A04
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 79 3e-15
SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12) 75 5e-14
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 62 3e-10
SB_10851| Best HMM Match : Chitin_bind_1 (HMM E-Value=4.4) 62 3e-10
SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 60 1e-09
SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_42840| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 32 0.27
SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08) 32 0.27
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.1
SB_3422| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_52934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 142 bits (343), Expect = 2e-34
Identities = 64/89 (71%), Positives = 76/89 (85%)
Frame = +2
Query: 2 KFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFG 181
KF ++E V+ AN TEYGLASGVFT+D+S+AL+ A+ ++AGT FVNTYNKTDVAAPFG
Sbjct: 171 KFDDGDVEGVLESANGTEYGLASGVFTKDMSKALRVADALEAGTCFVNTYNKTDVAAPFG 230
Query: 182 GFKQSGFGKDLGQEALNEYLKTKTVTVEY 268
G KQSGFGKDLG EALNEYLKTK +T+EY
Sbjct: 231 GCKQSGFGKDLGMEALNEYLKTKVITIEY 259
>SB_12802| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 880
Score = 78.6 bits (185), Expect = 3e-15
Identities = 32/63 (50%), Positives = 47/63 (74%)
Frame = +2
Query: 23 EDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGF 202
E+ + RANNT +GLA G+FTRD++RA + + AGT ++N++N T V PFGG+K SGF
Sbjct: 669 EEAVTRANNTTFGLAGGIFTRDLNRAHRVIGSLQAGTCWINSFNITPVEVPFGGYKMSGF 728
Query: 203 GKD 211
G++
Sbjct: 729 GRE 731
>SB_19772| Best HMM Match : Aldedh (HMM E-Value=5.9e-12)
Length = 211
Score = 74.5 bits (175), Expect = 5e-14
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +2
Query: 5 FSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGG 184
F ++M D+I RAN T YGLA V T+++ AL + + GTV+VN Y+ APFGG
Sbjct: 140 FRFKDMNDIIERANKTTYGLAGSVMTKNLENALMLSNSLRVGTVWVNCYDALSAQAPFGG 199
Query: 185 FKQSGFGKDL 214
+K SG G++L
Sbjct: 200 YKMSGVGREL 209
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/76 (40%), Positives = 52/76 (68%)
Frame = +2
Query: 14 RNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQ 193
R ++ + ANNT +GL + V+T ++S A++ + AG V++N +N D AA FGG+++
Sbjct: 1017 RTAKEAVAIANNTNFGLGASVWTENLSLAMEVGLSMKAGAVWINGHNLFDAAAGFGGYRE 1076
Query: 194 SGFGKDLGQEALNEYL 241
SG+G+D G+E L EY+
Sbjct: 1077 SGYGRDGGKEGLYEYV 1092
>SB_57708| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 528
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +2
Query: 26 DVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGFG 205
+ + AN+T+ GLA +++D+S+ + AE ++ G V VN + APFGG+KQSG G
Sbjct: 399 EAVAIANSTQSGLAGYFYSQDLSQVWRVAEALEVGLVGVNESMISTEVAPFGGWKQSGLG 458
Query: 206 KDLGQEALNEYLKTKTVTVEY*FTIYFTSV 295
+ + ++EYL+TK + F F +
Sbjct: 459 IEGSRYGIHEYLETKLFQIRMSFRHQFRQI 488
>SB_10851| Best HMM Match : Chitin_bind_1 (HMM E-Value=4.4)
Length = 186
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 14 RNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQ 193
+N+++ I AN ++YGL+ GV++ D+ +A Q A ++ G V +N D APFGG+KQ
Sbjct: 4 QNLDEAIALANQSDYGLSGGVWSADLEKAKQVAAKLRTGMVHLNGA-MVDARAPFGGYKQ 62
Query: 194 SGFGKDLGQEALN 232
SG G++ A N
Sbjct: 63 SGLGREWETTASN 75
>SB_58786| Best HMM Match : Aldedh (HMM E-Value=0)
Length = 421
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/88 (36%), Positives = 51/88 (57%)
Frame = +2
Query: 2 KFSSRNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVNTYNKTDVAAPFG 181
KFS+ E+VI AN T +GLAS ++++ SR A+ + G V +N+ + PFG
Sbjct: 332 KFSTD--EEVINLANKTRFGLASYFYSQNTSRVFNIADELQYGIVGINSGLISAENVPFG 389
Query: 182 GFKQSGFGKDLGQEALNEYLKTKTVTVE 265
G K SGFG++ L++Y+ K V ++
Sbjct: 390 GVKHSGFGREGSFYGLDDYINIKYVCLD 417
>SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/43 (48%), Positives = 34/43 (79%)
Frame = +2
Query: 14 RNMEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFV 142
+++++VI RANNT YGLA+GVFT+++ A+ + + AGTV+V
Sbjct: 719 KSVDEVIERANNTTYGLAAGVFTKNIDTAIAVSSGLRAGTVWV 761
>SB_42840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +2
Query: 89 VSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVTVE 265
V+ + F +AGTV+ N + D+ PFGG K SG G++ E+L + ++KT+ ++
Sbjct: 3 VTCVVPFDTEDEAGTVWCNCWLVRDLNMPFGGTKMSGVGREGTHESLEFFTESKTICIK 61
>SB_14803| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 20 MEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVN 145
+ED + N YG + +FT+ + A +FA++ + G + +N
Sbjct: 149 LEDAVEIINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGIN 190
>SB_32640| Best HMM Match : Aldedh (HMM E-Value=4.9e-08)
Length = 195
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 20 MEDVIRRANNTEYGLASGVFTRDVSRALQFAERIDAGTVFVN 145
+ED + N YG + +FT+ + A +FA++ + G + +N
Sbjct: 149 LEDAVEIINRNPYGNGTAIFTKSGAIARKFAQKANVGQIGIN 190
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = -2
Query: 201 KPDCLKPPKGAATSVLLYVLTNTVPASMRSANCSARDTSRVNTPLARPYSVLFARRITSS 22
KP PP AT+ T T PA+ + TP RP +L +RR S
Sbjct: 147 KPTTTTPP---ATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPTTRPLLLLCSRRTYSV 203
Query: 21 MFL 13
+FL
Sbjct: 204 LFL 206
>SB_3422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 27.5 bits (58), Expect = 7.7
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +2
Query: 89 VSRALQFAERIDAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLG-QEALNEYLKTKTV--- 256
+S Q ++ +D F++T + VA G FK GF K Q L LK T+
Sbjct: 179 ISITSQRSKFVDFSEPFIHTGSTILVAKRHGSFKGDGFLKPFKIQNPLASVLKFTTIRDT 238
Query: 257 TVEY*FTIYFTSVF 298
+VE F I F V+
Sbjct: 239 SVEKYFKINFPHVY 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,698,323
Number of Sequences: 59808
Number of extensions: 202963
Number of successful extensions: 485
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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