Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_A04
(553 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 28 0.072
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 25 0.39
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 24 0.89
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 24 0.89
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 1.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 2.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 3.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 3.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 3.6
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.3
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 8.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 8.3
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 27.9 bits (59), Expect = 0.072
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -2
Query: 534 NKFQDNELIHRYKNIRSCQSKIKVY----ILTSVLNYN*SGTFLNGCHNDSTYKIFYKMH 367
N F D+ +I +N++ + V I T ++N N S ++ +ND YK+ Y M
Sbjct: 168 NYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKYMRE-YNDPEYKLDYFME 226
Query: 366 FHDDNYY*HYVQ 331
+ N Y +Y++
Sbjct: 227 DVELNAYYYYMR 238
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 25.4 bits (53), Expect = 0.39
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = -2
Query: 534 NKFQDNELIHRYKNIRSCQSKIKVY----ILTSVLNYN*SGTFLNGCHNDSTYKIFYKMH 367
N F D+ +I +N++ + V I T ++N N S + +ND YK+ Y M
Sbjct: 168 NYFFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYSSKNMRE-YNDPEYKLDYFME 226
Query: 366 FHDDNYY*HYVQ 331
+ N Y +Y++
Sbjct: 227 DVELNAYYYYMR 238
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.89
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +3
Query: 339 SVNNNYHHGNAFYKK-FC---KSSHYDIH 413
S++NNY++ N YKK +C K +Y+I+
Sbjct: 84 SLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.89
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +3
Query: 339 SVNNNYHHGNAFYKK-FC---KSSHYDIH 413
S++NNY++ N YKK +C K +Y+I+
Sbjct: 84 SLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 336 HSVNN-NYHHGNAFYKKFCKSSHYDIH 413
H+ NN Y++ N Y CK +Y+I+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 336 HSVNN-NYHHGNAFYKKFCKSSHYDIH 413
H+ NN Y++ N Y CK +Y+I+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 336 HSVNN-NYHHGNAFYKKFCKSSHYDIH 413
H+ NN Y++ N Y CK +Y+I+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 336 HSVNN-NYHHGNAFYKKFCKSSHYDIH 413
H+ NN Y++ N Y CK +Y+I+
Sbjct: 91 HNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/20 (45%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Frame = +3
Query: 339 SVNNNYHHGNAFYKK-FCKS 395
S++NNY++ N YKK +C +
Sbjct: 84 SLSNNYNYNNNNYKKLYCNN 103
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 336 HSVNNNYHHGNAFYKKFCKSSHYDIHLER 422
++ NN Y++ N Y K +Y I++E+
Sbjct: 98 YNYNNKYNYNNNNYNKKLYYKNYIINIEQ 126
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 551 DSSLY*I-NFKTMN*FIDIKILDHVKVKLRFIY 456
+ SLY I NF +D+K ++V KL Y
Sbjct: 499 NGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFY 531
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 339 SVNNNYHHGNAFYKKFCKSSHYDI 410
S++N H N YK + K +Y+I
Sbjct: 317 SLSNKTIHNNNNYKNYNKKLYYNI 340
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 551 DSSLY*I-NFKTMN*FIDIKILDHVKVKLRFIY 456
+ SLY I NF +D+K ++V KL Y
Sbjct: 499 NGSLYAILNFSNEEQIVDLKAFNNVPKKLNMFY 531
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 6.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 441 NYN*SGTFLNGCHNDSTYKIFYK 373
NYN + N +N+ K++YK
Sbjct: 326 NYNNYNNYNNNNYNNYNKKLYYK 348
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 231 FRASWPRSFPKPDCLKP 181
F SW P+P LKP
Sbjct: 27 FLPSWDGKMPQPCILKP 43
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 405 HNDSTYKIFYKMHFHDDNYY 346
HN++ YK Y + +++N Y
Sbjct: 324 HNNNNYKYNYNNNNYNNNNY 343
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.0 bits (42), Expect = 8.3
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +2
Query: 125 AGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGQEALNEYLKTKTVT 259
+G + N Y + F + + +D LN Y++ K VT
Sbjct: 24 SGAIKGNDYQRYHQQISGDRFSKDFYRQDTKNNLLNAYVRFKLVT 68
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,615
Number of Sequences: 438
Number of extensions: 2143
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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