Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P23
         (445 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL365445-2|CAI22836.1|  342|Homo sapiens DMRT-like family B with...    31   2.4  
AK057273-1|BAB71407.1|  342|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AJ291671-1|CAC40654.1|  336|Homo sapiens doublesex-mab-3 (DM) do...    31   2.4  
BC029566-1|AAH29566.1|  189|Homo sapiens DMRTB1 protein protein.       30   4.1  

>AL365445-2|CAI22836.1|  342|Homo sapiens DMRT-like family B with
           proline-rich C-terminal, 1 protein.
          Length = 342

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
 Frame = +2

Query: 149 NPDPFFSQPSNGPSGNYEPIS---------TGPAFGRFQIIXNYPXPSDTKQPSRPVVGK 301
           NP P   QP  G   + EP            GP FG       YP P D ++P R V G 
Sbjct: 128 NPGPRALQPVLGGRSHVEPSERAAVAMPSLAGPPFGAEAAGSGYPGPLDLRRPMRTVPGP 187

Query: 302 L 304
           L
Sbjct: 188 L 188


>AK057273-1|BAB71407.1|  342|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32711 fis, clone TESTI2000707, weakly similar to
           DOUBLESEX PROTEIN, MALE-SPECIFIC. ).
          Length = 342

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
 Frame = +2

Query: 149 NPDPFFSQPSNGPSGNYEPIS---------TGPAFGRFQIIXNYPXPSDTKQPSRPVVGK 301
           NP P   QP  G   + EP            GP FG       YP P D ++P R V G 
Sbjct: 128 NPGPRALQPVLGGRSHVEPSERAAVAMPSLAGPPFGAEAAGSGYPGPLDLRRPMRTVPGP 187

Query: 302 L 304
           L
Sbjct: 188 L 188


>AJ291671-1|CAC40654.1|  336|Homo sapiens doublesex-mab-3 (DM)
           domain protein.
          Length = 336

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
 Frame = +2

Query: 149 NPDPFFSQPSNGPSGNYEPIS---------TGPAFGRFQIIXNYPXPSDTKQPSRPVVGK 301
           NP P   QP  G   + EP            GP FG       YP P D ++P R V G 
Sbjct: 122 NPGPRALQPVLGGRSHVEPSERAAVAMPSLAGPPFGAEAAGSGYPGPLDLRRPMRTVPGP 181

Query: 302 L 304
           L
Sbjct: 182 L 182


>BC029566-1|AAH29566.1|  189|Homo sapiens DMRTB1 protein protein.
          Length = 189

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 203 PISTGPAFGRFQIIXNYPXPSDTKQPSRPVVGKL 304
           P   GP FG       YP P D ++P R V G L
Sbjct: 2   PSLAGPPFGAEAAGSGYPGPLDLRRPMRTVPGPL 35


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,386,535
Number of Sequences: 237096
Number of extensions: 1303864
Number of successful extensions: 2809
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)