Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P22
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical p...    27   9.8  
Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe...    27   9.8  
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe...    27   9.8  
AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical ...    27   9.8  
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.     27   9.8  

>Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical
           protein ZK909.5 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 331 YSAKDYDTFYKTTVYMKDRVNQDLYIYVLST 423
           YS   Y   +K+ +Y K+R NQ+ YI V+ +
Sbjct: 69  YSETQYWYTFKSDIYRKERTNQEGYIEVMKS 99


>Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical
           protein F53C11.1 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 241 KQNWLLPLSVPFSPLNPTHQFEAVIMFNV 327
           KQN+     V F+PL PTH +  V+ ++V
Sbjct: 280 KQNFPGEKFVSFTPLTPTHAYSNVLAYSV 308


>Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical
           protein B0334.6 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +1

Query: 259 PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHR 438
           PLS+P    + +  F       VLY      TFYK++V +    N + Y+ V+  L+ HR
Sbjct: 102 PLSIPSLAFSTS--FNHFYSRIVLYIRTLASTFYKSSVLIVVAFNIERYLCVVCPLNSHR 159


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 176  LQLAEIVIDFET*FGSRA-WKYNKEISIC 93
            +Q  +I+ DFE  FGSR  WK   E  IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 176  LQLAEIVIDFET*FGSRA-WKYNKEISIC 93
            +Q  +I+ DFE  FGSR  WK   E  IC
Sbjct: 1296 VQKFQIISDFENYFGSRGLWKNYLEAMIC 1324


>U53148-2|AAB37078.1|  360|Caenorhabditis elegans Hypothetical
           protein C26F1.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = -3

Query: 233 KIHIFTAVSFL*WFILFSILQLAEIVIDFET*FGSRAWKYNKEISICFFANSTESSVLTG 54
           K+ I   + FL  +I   IL + EI +D ET  G   W  N   ++    NST + V   
Sbjct: 228 KMMIMVVLVFLVCYIFSFILNIWEI-LDKETFGGDIGWFMNDINNVLIVVNSTSAIVFYY 286

Query: 53  SHNPGAKMSANT 18
            ++   +  A T
Sbjct: 287 KYSTRFRNQART 298


>Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical
           protein F59A1.11b protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 220 KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 363
           +++I+ KK   LL  +++P   + P    +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183


>Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical
           protein F59A1.11a protein.
          Length = 303

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 220 KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 363
           +++I+ KK   LL  +++P   + P    +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183


>Z69788-2|CAA93645.1|  303|Caenorhabditis elegans Hypothetical
           protein F09A5.3 protein.
          Length = 303

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 122 WKYNKEISICFFANSTESSVLTGSHNPGAKM-SANTNKL 9
           + + KE+ + F    T S+VL G H    +M   N N++
Sbjct: 65  YSFMKEVEVAFMEQDTISNVLRGGHGEWCEMFKDNANEM 103


>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
           defective protein 27,isoform b protein.
          Length = 1124

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  GLCDPVRTDDSVEFAKKQIDISLLYF 120
           G+  P+  DD  EF++K  DI   Y+
Sbjct: 30  GVSSPMENDDEPEFSQKHYDIEPCYY 55


>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
           defective protein 27,isoform a protein.
          Length = 1129

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  GLCDPVRTDDSVEFAKKQIDISLLYF 120
           G+  P+  DD  EF++K  DI   Y+
Sbjct: 30  GVSSPMENDDEPEFSQKHYDIEPCYY 55


>AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical
           protein Y47H9C.1 protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +1

Query: 322 NVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHRSDLEGYAI-PPIY 474
           N+  SA+  DT +  +VY+    N    + ++     +  +++GY + PP Y
Sbjct: 42  NIYISAQSDDTSFLASVYIVTAKNSKSLLNIMQDNLQNTGEIQGYPVDPPAY 93


>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
          Length = 1129

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  GLCDPVRTDDSVEFAKKQIDISLLYF 120
           G+  P+  DD  EF++K  DI   Y+
Sbjct: 30  GVSSPMENDDEPEFSQKHYDIEPCYY 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,661,229
Number of Sequences: 27780
Number of extensions: 291321
Number of successful extensions: 769
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)