Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P21
(566 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 31 0.12
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 28 0.83
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 27 1.9
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 1.9
SPBC16G5.04 |mrpl23||mitochondrial ribosomal protein subunit L13... 27 1.9
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 27 1.9
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 27 2.5
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 26 4.4
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 26 4.4
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 5.9
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 25 7.7
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 25 7.7
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 31.1 bits (67), Expect = 0.12
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 196 VMASKFKSEKVGIVGSGLIGRSWA--MLFASVGYQVTLFDVVEKQITDAIADI 348
V +S FKS K+ IVG+G +G + A +L + + ++ + D+ +K+ D+
Sbjct: 13 VRSSSFKSIKIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLNKKKAEGEAMDL 65
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 28.3 bits (60), Expect = 0.83
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -1
Query: 407 SAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTW---YPTEANNIAHDLPISPLP 237
SA R P F + + ++S + S S N ++ YP E N ++DLPIS
Sbjct: 361 SAGRTQFGDPDFLPLDHLDVVSKLLSKEFASQIRNNISLSKTYPWEHYNPSYDLPISHGT 420
Query: 236 TIPTFSDLNLEAMTTRSVCN 177
T + D N A++ S N
Sbjct: 421 THVSTVDSNNLAVSITSTVN 440
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 208 KFKSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVV 315
+ + + +GI+G G IG ++L ++G V +D++
Sbjct: 192 EIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDIL 227
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -1
Query: 242 LPTIPTFSDLNLEAMTTRSVCNGRHTT 162
+PT TF +L L A T C+GR+TT
Sbjct: 477 VPTPETFVNLGLNANPTFFGCDGRNTT 503
>SPBC16G5.04 |mrpl23||mitochondrial ribosomal protein subunit
L13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 157
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 475 TEIGILNRQSLNHRYLSHIG 416
+EIGI R+ NH+Y SH G
Sbjct: 61 SEIGISGRKLENHKYYSHSG 80
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 220 EKVGIVGSGLIGRSWAMLFASVGYQV 297
++VGI+G G IG+S+A +G ++
Sbjct: 160 KRVGIIGMGAIGKSFAQKILPLGCEI 185
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 223 KVGIVGSGLIGRSWAMLFASVGYQVTLFD 309
+VGI+G G +GR +A + G++V + D
Sbjct: 6 QVGIIGFGDMGRLYAEYISKAGWRVNVCD 34
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 220 EKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADI-KVQLKTLEKDGL 384
+K+ ++G G+IG +++ +G +VT+ + + ADI K + + K G+
Sbjct: 218 KKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGPMDADISKALSRIISKQGI 273
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +3
Query: 372 ERWTPKGKSKCG*TVPMCERYL*FSDCRXRIPISVTRLRPGKFGTQND 515
+RW K T+ C R L + D R SV + P Q D
Sbjct: 194 DRWKTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGIEFQTD 241
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 386 RSPSFSKVF---NCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPT 225
R+P + K +CT ++ +A + + + + T A D I+P+PT+P+
Sbjct: 127 RNPEYIKGLCYDSCTPLANLAVGLSLNIQEVLIDCFATAACFTTEDTSINPIPTLPS 183
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 5.9
Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = -1
Query: 542 TTLSKFWNTVVLSSKFSGTQSCYGNWNPXPAIAKSQVPFTHWNCSSAFRFPLRSPSFSKV 363
+T + +T V S+ + T P + + P T NC+++ P S +
Sbjct: 430 STSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTS- 488
Query: 362 FNCTLISAIASVICFSTTSNKVTWYPTEANN--IAHDLPISPLPTIPT 225
+ + + C ++TS T P ++N I+ P++ P T
Sbjct: 489 ------TPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTT 530
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 7.7
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -1
Query: 317 STTSNKVTWY-PTEANNIAH--DLPISPLPTIPTFSDLNLE 204
ST+ N+V ++ P + IA D P+S +PT PT S+ +++
Sbjct: 336 STSDNRVMFFLPWQGKVIAGTTDKPLSSVPTNPTPSEDDIQ 376
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 25.0 bits (52), Expect = 7.7
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Frame = -1
Query: 476 YGNWNPXPAIAKSQVPFTHWNCSSAFRFPLRSPSFSKVFNCTLIS----AIASVICFSTT 309
Y WN + + P+T W+ + R L+ F LIS +I + + S+T
Sbjct: 468 YKEWNAANQVNDPESPYTFWSKALELRKELKDAVVYGSFE--LISEEDPSIVAFVRESST 525
Query: 308 SNKVTWYPTEANNIAHDLPIS 246
+ N +++D P++
Sbjct: 526 YKLIILLNFTGNKVSYDCPLN 546
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,365,782
Number of Sequences: 5004
Number of extensions: 47480
Number of successful extensions: 152
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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