Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P20
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0537 + 3860277-3860286,3860464-3860576,3861729-3861799,386... 53 9e-08
06_01_0527 + 3822051-3822318,3822408-3822520,3823673-3823743,382... 53 9e-08
10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397 41 4e-04
10_07_0109 + 12952293-12952952,12953049-12953402,12953494-129538... 40 0.001
10_07_0105 + 12922828-12923448,12923554-12923907,12924008-129243... 40 0.001
10_07_0106 - 12933918-12934041,12934164-12934486,12934584-129349... 37 0.006
06_01_0963 + 7411944-7412396,7412677-7412736,7412828-7413010,741... 37 0.008
03_03_0129 - 14684003-14684123,14684205-14684323,14684406-146845... 30 0.97
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 29 1.3
11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118 29 2.3
09_02_0478 - 9749306-9749382,9749543-9749659,9749711-9750398,975... 29 2.3
02_02_0431 - 10152228-10152352,10152688-10152919,10153602-101538... 28 3.9
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 28 3.9
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 27 5.2
05_05_0136 - 22631260-22631325,22631735-22631821,22631898-226320... 27 6.9
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 27 9.1
03_02_0361 - 7800879-7801484,7801614-7802513 27 9.1
02_05_0681 + 30842038-30842301,30843067-30843300,30843409-308435... 27 9.1
>06_01_0537 +
3860277-3860286,3860464-3860576,3861729-3861799,
3861887-3861978,3862080-3862167,3862264-3862375,
3862503-3862599,3862710-3862791,3863153-3863273,
3863459-3863566,3863717-3863819,3863996-3864171
Length = 390
Score = 53.2 bits (122), Expect = 9e-08
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
+A LE A F SG+ A + LL G I++ +D+YGG++RLL QV R GI
Sbjct: 67 MAKLEKADQAFCFTSGMAALAAVTHLLKSGQEIVAGEDIYGGSDRLLSQVAPRHGI 122
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 170 PIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRM 274
P+ + TFKQ + T + Y+Y RSGNPTR+ L +
Sbjct: 32 PLYQTATFKQPSATDNGPYDYTRSGNPTRDVLQSL 66
>06_01_0527 +
3822051-3822318,3822408-3822520,3823673-3823743,
3823831-3823922,3824024-3824111,3824208-3824319,
3824447-3824543,3824654-3824735,3825097-3825217,
3825403-3825510,3825661-3825763,3825940-3826115
Length = 476
Score = 53.2 bits (122), Expect = 9e-08
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
+A LE A F SG+ A + LL G I++ +D+YGG++RLL QV R GI
Sbjct: 153 MAKLEKADQAFCFTSGMAALAAVTHLLKSGQEIVAGEDIYGGSDRLLSQVAPRHGI 208
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 170 PIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRM 274
P+ + TFKQ + T + Y+Y RSGNPTR+ L +
Sbjct: 118 PLYQTATFKQPSATDNGPYDYTRSGNPTRDVLQSL 152
>10_08_0637 - 19482088-19482108,19482280-19482881,19484611-19485397
Length = 469
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIA-SLLSKGDHILSSDDVYGGTNRLLRQVVSR 434
+AALEG + A ASG+ A +++ L+ G H+++S +YGGT+ LL + + R
Sbjct: 114 MAALEGTEAAYCTASGMSAISSVLMQLVGAGGHVVASRCLYGGTHALLSRFLPR 167
>10_07_0109 +
12952293-12952952,12953049-12953402,12953494-12953816,
12953939-12954062
Length = 486
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 ECLAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
E ++ALE + LV +SG+ A T+ +L+ G H++++ D Y +R +S MGI
Sbjct: 161 EKISALERAEATLVTSSGMNAIVATLLALVPPGGHVVATADCYSEARAFIRDKLSNMGI 219
Score = 33.1 bits (72), Expect = 0.10
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Frame = +2
Query: 110 TQAIHAGQDPDKW--DSAAVVAPIVTSTT--FKQTAPTV------HNGYEYGRSGNPTRN 259
T A+HAG+ ++ ++ PIV+ TT F+ +A + +EYGR GNPT
Sbjct: 98 TLAVHAGEKLGSGAAETDSIATPIVSGTTHWFRDSADLIAFREGRRRSFEYGRYGNPTVK 157
Query: 260 TLD 268
L+
Sbjct: 158 VLE 160
>10_07_0105 +
12922828-12923448,12923554-12923907,12924008-12924330,
12928324-12928401,12928760-12928883
Length = 499
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 ECLAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
E ++ALE + LV +SG+ A T+ +L+ G H++++ D Y +R +S MGI
Sbjct: 148 EKISALERAEATLVTSSGMNAIVATLLALVPPGGHVVATADCYSEARAFIRDKLSNMGI 206
Score = 32.3 bits (70), Expect = 0.18
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 12/65 (18%)
Frame = +2
Query: 110 TQAIHAGQDPDKWDSAA----VVAPIVTSTT--FKQTAPTV------HNGYEYGRSGNPT 253
T A+HAG+ +AA + PIV TT F+ +A + +EYGR GNPT
Sbjct: 83 TLAVHAGEKLGSGAAAAETDSIATPIVGGTTHWFRDSADLIAFREGRRRSFEYGRYGNPT 142
Query: 254 RNTLD 268
L+
Sbjct: 143 VKVLE 147
>10_07_0106 -
12933918-12934041,12934164-12934486,12934584-12934937,
12935029-12935646
Length = 472
Score = 37.1 bits (82), Expect = 0.006
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 ECLAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
E ++ALE + LV +SG+ A T+ +L+ G H++ + D Y + +S+MGI
Sbjct: 147 EKISALERAEATLVTSSGMNAIVATLLALVPPGGHVVVTADCYSEARAFIHDKLSKMGI 205
Score = 33.1 bits (72), Expect = 0.10
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Frame = +2
Query: 110 TQAIHAGQDPDKW--DSAAVVAPIVTSTT--FKQTAPTV------HNGYEYGRSGNPTRN 259
T A+HAG+ ++ ++ PIV+ TT F+ +A + +EYGR GNPT
Sbjct: 84 TLAVHAGEKLGSGAAETDSIATPIVSGTTHWFRDSADLIAFREGWRRSFEYGRYGNPTVK 143
Query: 260 TLD 268
L+
Sbjct: 144 VLE 146
>06_01_0963 +
7411944-7412396,7412677-7412736,7412828-7413010,
7413259-7413339,7414219-7414541,7414961-7415084
Length = 407
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
++A+E + +V +SG+ A T+ +++ G H++++ D Y +R +S+MGI
Sbjct: 94 ISAMEKAEATIVTSSGMNAIVATLLAVVPPGGHVVATTDCYSEARAFIRDRLSKMGI 150
>03_03_0129 -
14684003-14684123,14684205-14684323,14684406-14684501,
14684605-14684712,14684974-14685060,14685135-14685338,
14685429-14685488,14686096-14686264,14686400-14686473,
14686586-14686897,14687054-14687212
Length = 502
Score = 29.9 bits (64), Expect = 0.97
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIAS-LLSKGDHILSSDDVYGGTNRLLRQVVSRMGI 443
++ALE + + ASG+ A+ + S L+ G H++++ D Y T + + + GI
Sbjct: 181 MSALEKAESTVFVASGMYASVAMLSALVPAGGHVVTTTDCYRKTRIYMETELPKRGI 237
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 215 HNGYEYGRSGNPTRNTLDR 271
H +EYGR GNPT L++
Sbjct: 161 HASFEYGRYGNPTTEALEK 179
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 291 GGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGT 404
GGK ++ LG T+ L K I+ +DV+ GT
Sbjct: 115 GGKRRIIIPPELGPPDTVGKALLKISSIIKIEDVFAGT 152
>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
Length = 325
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +2
Query: 215 HNGYEYGRSGNPTRNTLD---RMPRSFGGRETRFGLCLWSWSYHYNRFTTQQRGSHLVLG 385
H +G PT ++D ++ R FG + +G L + +RG H
Sbjct: 228 HRARAVTEAGPPTAKSVDELKKLKRQFGTWKKEYGARLRKTKAELKKLVRSERGGHGNRR 287
Query: 386 RCIRW 400
RC W
Sbjct: 288 RCCSW 292
>09_02_0478 -
9749306-9749382,9749543-9749659,9749711-9750398,
9750521-9751161,9751336-9751462
Length = 549
Score = 28.7 bits (61), Expect = 2.3
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 W*RLN*IVNDLRDALTEY-KMSEDGFLKPKTGFATQAIHAGQDPDKWDSAAVVAPIVTST 187
W N + L+ A E+ + D F K T F + + K AA+V ++ +T
Sbjct: 256 WTARNLMYETLKCAKAEHGNIRRDRFEKDYT-FQADVENESERMTKLAQAAIVGSVLIAT 314
Query: 188 TFKQTAPTVHNGYEYGRSGNPT 253
A T+ GY SG PT
Sbjct: 315 VTFAAAFTLPGGYRQDDSGTPT 336
>02_02_0431 -
10152228-10152352,10152688-10152919,10153602-10153808,
10153915-10154034,10154114-10154260,10155080-10155147,
10155502-10155667,10156765-10156914,10157219-10157335,
10158177-10158281,10159050-10159147,10159594-10159763,
10161489-10161511,10161927-10162006,10162191-10162259,
10163198-10163442,10163614-10163810
Length = 772
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 152 SAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNP 250
S AV AP+ T + T H+GY Y + P
Sbjct: 43 STAVAAPVYAPTPRDRALRTPHSGYHYDGTARP 75
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 77 DGFLKPKTGFATQAIHAGQDPDKWDSAAVVAPI 175
+GF+ P G A I G+ P WD + A I
Sbjct: 344 NGFMSPNMGRAVGDIEMGRKPVAWDEPRMAADI 376
>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 347 SDCSGSSKTRGKDQSVFPALQSCEAFCLKCS*SDFQIFRIHNHCGRS 207
+DC G+ D + F + SCE F ++CS D IH H R+
Sbjct: 1300 ADCLGA--LGAVDPAKFKVM-SCERFKIECSDDDLIFELIHKHLARA 1343
>05_05_0136 - 22631260-22631325,22631735-22631821,22631898-22632026,
22632122-22632190,22632271-22632351,22632598-22632702,
22632786-22633016,22633098-22634272,22634391-22634457,
22636705-22637778,22638119-22638274,22638827-22638985,
22639062-22639220,22639306-22639422,22639502-22639612,
22639690-22640358
Length = 1484
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 424 TCLNNLFVPPYTSSEDKM*SPLL 356
TC N L +PPY SS+DKM LL
Sbjct: 1450 TCANYLKLPPY-SSKDKMREKLL 1471
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/45 (24%), Positives = 19/45 (42%)
Frame = +2
Query: 41 LRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPDKWDSAAVVAPI 175
+ L + +++ GF+ P G + G+ P WD A I
Sbjct: 401 VEQGLQQTRVASRGFMSPNMGKPVGDLEMGRKPVPWDEPRTAADI 445
>03_02_0361 - 7800879-7801484,7801614-7802513
Length = 501
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 35 NDLRDALTEYKMSED--GFLKPKTGFA-TQAIHAGQD 136
ND DAL +Y+ ED GF +P F T AG D
Sbjct: 272 NDFLDALLDYRSPEDGRGFDRPTLQFLFTDLFSAGSD 308
>02_05_0681 +
30842038-30842301,30843067-30843300,30843409-30843578,
30844130-30844474,30844475-30844661,30844747-30844798,
30844843-30845108,30845302-30845400,30845577-30846292,
30846616-30847098,30847288-30847546
Length = 1024
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 252 LGTL*TECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSD 386
+G ++CLA L GG+ + +G+T T +++L + SSD
Sbjct: 669 IGLSISKCLAELMGGQISFTSRPFVGSTFTFSAVLKRSCKDTSSD 713
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,487,296
Number of Sequences: 37544
Number of extensions: 221059
Number of successful extensions: 618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -