Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P20
(446 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 7e-16
SB_31044| Best HMM Match : Cys_Met_Meta_PP (HMM E-Value=4.7e-05) 31 0.43
SB_21078| Best HMM Match : P120R (HMM E-Value=0.44) 29 2.3
SB_56785| Best HMM Match : TGS (HMM E-Value=6.2e-31) 28 4.0
SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39) 27 5.3
SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26) 27 5.3
SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28) 27 5.3
SB_26755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8) 27 5.3
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 27 5.3
SB_23826| Best HMM Match : MFMR (HMM E-Value=7.3) 27 7.1
SB_31838| Best HMM Match : CXCXC (HMM E-Value=0.7) 27 9.3
SB_46243| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 27 9.3
>SB_3123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 80.2 bits (189), Expect = 7e-16
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +2
Query: 104 FATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRMPRS 283
F T AIHAGQ+P+KW S AVV PI STTFKQ AP V+ YEY RSGNPTR + +
Sbjct: 15 FGTLAIHAGQEPEKWTSRAVVPPISLSTTFKQDAPGVYKQYEYSRSGNPTRTCFEECVAA 74
Query: 284 FGG 292
G
Sbjct: 75 LEG 77
Score = 60.5 bits (140), Expect = 6e-10
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +3
Query: 270 ECLAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQVVS 431
EC+AALEGGKH + +SGL AT + L GDHI DDVYGG + + V++
Sbjct: 70 ECVAALEGGKHGIATSSGLAATMLLVHTLKSGDHIACIDDVYGGHSDVCTGVIA 123
>SB_31044| Best HMM Match : Cys_Met_Meta_PP (HMM E-Value=4.7e-05)
Length = 157
Score = 31.1 bits (67), Expect = 0.43
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 270 ECLAALEGGKHALVFASGLGATT-TIASLLSKGDHILSSDDVY 395
+ + LEGG ++F G A +I + + +GDH+L ++ Y
Sbjct: 110 QAMCELEGGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAY 152
>SB_21078| Best HMM Match : P120R (HMM E-Value=0.44)
Length = 585
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 327 GATTTIASLLSKGDHILSSDDVYGGT 404
GA+ T A LL+KG +LS + GGT
Sbjct: 167 GASVTTAGLLAKGGLVLSGSSMPGGT 192
>SB_56785| Best HMM Match : TGS (HMM E-Value=6.2e-31)
Length = 303
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 309 VFASGLGATTTIASLLSKGDHILSSDDVYGGT 404
+ A GLG T + + GD S+D YGGT
Sbjct: 245 IVAGGLGVTGNNVAAAAGGDGFDGSNDSYGGT 276
>SB_43677| Best HMM Match : K_tetra (HMM E-Value=6.4e-39)
Length = 218
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3
Query: 441 YPFLIRLVLTIYSCHRIHRPRTRCDPL 361
+P L ++L Y ++H PR C PL
Sbjct: 64 HPDLFAIILNYYRTGKLHAPRDCCGPL 90
>SB_33803| Best HMM Match : Aminotran_1_2 (HMM E-Value=2.6e-26)
Length = 391
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSD 386
+A G + A+VF G +T I L+SKGD I+S +
Sbjct: 156 VARFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDE 193
>SB_33262| Best HMM Match : DOMON (HMM E-Value=2.7e-28)
Length = 595
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGA-TTTIASLLSKGDHILSSD 386
+A G + A+VF G +T I L+SKGD I+S +
Sbjct: 13 VARFVGKESAMVFGMGFATNSTNIPVLVSKGDLIISDE 50
>SB_26755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1607
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 149 DSAAVVAPIVTSTTFKQTAPTVHNGY-EYGRSGNPTRNTLDRMPRSFGGRETRFGLCLWS 325
D +V P+V S+ G+ G SG+ + + + +GG +R G+ +
Sbjct: 98 DMRSVTRPLVCSSAITIDTTRPSGGWVRDGTSGDASYQSTKDISAVWGGFNSRHGIARYE 157
Query: 326 WSYHYNRF 349
W Y F
Sbjct: 158 WQVLYTPF 165
>SB_57195| Best HMM Match : UPF0126 (HMM E-Value=1.8)
Length = 1699
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 149 DSAAVVAPIVTSTTFKQTAPTVHNGY-EYGRSGNPTRNTLDRMPRSFGGRETRFGLCLWS 325
D +V P+V S+ G+ G SG+ + + + +GG +R G+ +
Sbjct: 44 DMRSVTRPLVCSSAITIDTTRPSGGWVRDGTSGDASYQSTKDISAVWGGFNSRHGIARYE 103
Query: 326 WSYHYNRF 349
W Y F
Sbjct: 104 WQVLYTPF 111
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 288 EGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRL 413
+ G + V ++ LG TT+A L KG H + G +RL
Sbjct: 4325 DSGSYRAVASNNLGEATTLAELTVKGKHFARELEEGGCHSRL 4366
>SB_23826| Best HMM Match : MFMR (HMM E-Value=7.3)
Length = 540
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 178 HIHHV*TNCSDRPQWL*IRKI 240
H+ HV TN SD+P W I+ I
Sbjct: 89 HLTHVQTNVSDKPLWAKIQAI 109
>SB_31838| Best HMM Match : CXCXC (HMM E-Value=0.7)
Length = 346
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +2
Query: 131 QDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRMPR 280
+DP+ + S A P+ + + P + + Y R +P+ DR+ R
Sbjct: 191 EDPELYQSRAYSEPLPRTKPRLFSTPKFSSSHSYARVSSPSEEIHDRVER 240
>SB_46243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 332 SSKTRGKDQSVFPALQSC 279
S +T+G D SV+PA++ C
Sbjct: 109 SERTQGNDDSVWPAIKKC 126
>SB_38101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 26.6 bits (56), Expect = 9.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 251 TRNTLDRMPRSFGGRETRFGLCLWSWSYHYN 343
T+N L + PR+F + + G C W Y+
Sbjct: 26 TQNLLQQAPRAFDKQFRKIGFCYGQWQPAYD 56
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 122 HAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRMPRSFGGRET 301
H P+K + + +PI ++ ++T PTV E GR+ + R G +T
Sbjct: 33 HEKLSPEKTKTNEIESPIKEGSSQRRTKPTVLFALEEGRT---LEAVIKNYERDIDGLKT 89
Query: 302 RFGLCLWS 325
+ G L++
Sbjct: 90 KLGEKLYT 97
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,261,915
Number of Sequences: 59808
Number of extensions: 247822
Number of successful extensions: 715
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 883875528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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