Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P20
(446 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical pr... 70 9e-13
U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical p... 69 2e-12
Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81467-5|CAN86602.1| 172|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical ... 29 2.0
U41264-9|AAA82429.3| 240|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 27 6.2
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 27 6.2
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr... 27 8.2
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 8.2
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.2
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.2
>Z83106-5|CAB05492.1| 392|Caenorhabditis elegans Hypothetical
protein F22B8.6 protein.
Length = 392
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/58 (55%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQV-VSRMGID 446
LAALEG KH F+SGL A++ + +LL+ GDHI+ SDDVYGGT R +RQ+ V + G++
Sbjct: 64 LAALEGAKHCQAFSSGLAASSAVINLLNHGDHIVCSDDVYGGTIRYIRQIAVKKYGME 121
Score = 66.9 bits (156), Expect = 6e-12
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +2
Query: 104 FATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDR 271
F T A+H GQ+P++WD VV PI STT+KQ P Y+Y R GNPTR+ L +
Sbjct: 7 FGTDAVHVGQEPEQWDINQVVPPISMSTTYKQDNPGEPKRYDYARGGNPTRDVLQK 62
>U58758-12|AAB93432.1| 392|Caenorhabditis elegans Hypothetical
protein ZK1127.10 protein.
Length = 392
Score = 68.5 bits (160), Expect = 2e-12
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +3
Query: 276 LAALEGGKHALVFASGLGATTTIASLLSKGDHILSSDDVYGGTNRLLRQV 425
LAALE KH VF+SGL AT+ I +LL GDHI+ SDDVYGGT R +R+V
Sbjct: 64 LAALEDAKHCQVFSSGLAATSAIINLLKYGDHIVCSDDVYGGTQRYIRRV 113
Score = 67.3 bits (157), Expect = 5e-12
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +2
Query: 104 FATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDR 271
F T AIH GQ+P++WD VV PI S+T+KQ P G++Y R+GNPTR+ L +
Sbjct: 7 FGTAAIHVGQEPEQWDMNQVVPPISLSSTYKQDNPGEPKGHDYSRAGNPTRDVLQK 62
>Z81467-4|CAB03873.2| 451|Caenorhabditis elegans Hypothetical
protein C12C8.2a protein.
Length = 451
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 LEGGKHALVFASGLGATTTI-ASLLSKGDHILSSDDVYGGTNRLLRQVVSRMGID 446
+EGG +L++ SGL A + + LS G H++ + +Y GT+ + + ++R G++
Sbjct: 129 IEGGAGSLLYNSGLAAISAVFLEFLSSGAHMIVMNPIYSGTSSFINETLARFGVE 183
>Z81467-5|CAN86602.1| 172|Caenorhabditis elegans Hypothetical
protein C12C8.2b protein.
Length = 172
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 285 LEGGKHALVFASGLGATTTI-ASLLSKGDHILSSDDVY 395
+EGG +L++ SGL A + + LS G H++ + +Y
Sbjct: 129 IEGGAGSLLYNSGLAAISAVFLEFLSSGAHMIVMNPIY 166
>AF067607-3|AAF98607.1| 590|Caenorhabditis elegans Hypothetical
protein C18H7.6 protein.
Length = 590
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 134 DPDKWDSAAVVAPIVTSTTFKQTAPTVH--NGYEYGRSGNPTRNTLDRMPR 280
DP D AP VT+ F V+ + YE R+G NTLDR+ +
Sbjct: 417 DPIHLDIYDAAAPFVTAVIFFYARQAVNRQSTYEADRTGPNAPNTLDRISK 467
>U41264-9|AAA82429.3| 240|Caenorhabditis elegans Hypothetical
protein F10E7.2 protein.
Length = 240
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 127 SVNSLSRKPSFWLQKSVFRHFIFC*CVSKIVNNSI 23
S++SLSR PS ++ S +C C++ I+ SI
Sbjct: 186 SISSLSRSPSIFVPVSTVFLTTYCLCLTLILKRSI 220
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 263 LDRMPRSFGGRETRFGLCLWSWSYHYNRFTTQQR 364
L R + FGG L W W N+FT+++R
Sbjct: 934 LKRNVQYFGGFHGNHRLIKWLWDILENKFTSEER 967
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 149 DSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTL 265
D + ++PIVT F+ VH EYG SG+ N +
Sbjct: 75 DKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGSSFFNAM 113
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 VNDLRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPD-KWDSAAV 163
VND D++ ++EDG L +G + PD KW ++
Sbjct: 3115 VNDDEDSVLSVSINEDGILTVTSGEDIATLELAASPDEKWHYVSI 3159
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 VNDLRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPD-KWDSAAV 163
VND D++ ++EDG L +G + PD KW ++
Sbjct: 3115 VNDDEDSVLSVSINEDGILTVTSGEDIATLELAASPDEKWHYVSI 3159
>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
protein ZK1067.2 protein.
Length = 2219
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 360 KGDHILSSDDVYGGTN 407
+GDHILSS+DV+ N
Sbjct: 105 EGDHILSSEDVHAARN 120
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 VNDLRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPD-KWDSAAV 163
VND D++ ++EDG L +G + PD KW ++
Sbjct: 929 VNDDEDSVLSVSINEDGILTVTSGEDIATLELAASPDEKWHYVSI 973
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 VNDLRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPD-KWDSAAV 163
VND D++ ++EDG L +G + PD KW ++
Sbjct: 3115 VNDDEDSVLSVSINEDGILTVTSGEDIATLELAASPDEKWHYVSI 3159
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 32 VNDLRDALTEYKMSEDGFLKPKTGFATQAIHAGQDPD-KWDSAAV 163
VND D++ ++EDG L +G + PD KW ++
Sbjct: 3115 VNDDEDSVLSVSINEDGILTVTSGEDIATLELAASPDEKWHYVSI 3159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,753,268
Number of Sequences: 27780
Number of extensions: 183373
Number of successful extensions: 484
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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