Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P20
         (446 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.29 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    24   0.66 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   0.87 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    23   1.5  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    22   3.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.1  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.1  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 257 NTLDRMPRSFGGRETRFGLCLWSWSYHYNRFTTQQ 361
           ++++ + R+F   E R   CL S   +Y++  TQQ
Sbjct: 360 DSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQ 394


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 24.2 bits (50), Expect = 0.66
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 272 MPRSFGGRET--RFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 394
           +P    GR+T  R+        +HYNR+ T++R   +    C+
Sbjct: 5   VPERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 47


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 2/98 (2%)
 Frame = +2

Query: 107 ATQAIHAGQDPDKWDSAAVVAPIVTSTTFKQTAPTVHNGYEYGRSGNPTRNTLDRMPRSF 286
           A+Q    G  P +   A     +VTS    Q       G       +P    +       
Sbjct: 213 ASQQSQPGMHPRQQQQAQQHQGVVTSP-LSQQQQAAPQGAASANLPSPLYPWMRSQFERK 271

Query: 287 GGRET--RFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 394
            GR+T  R+        +HYNR+ T++R   +    C+
Sbjct: 272 RGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCL 309


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 275 PRSFGGRE-TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 394
           PR  G +  TRF        +HYN + T++R   +    C+
Sbjct: 7   PRRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCL 47


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 299 TRFGLCLWSWSYHYNRFTTQQRGSHLVLGRCI 394
           TR+        +H+NR+ T++R   +    C+
Sbjct: 16  TRYQTLELEKEFHFNRYLTRRRRIEIAHALCL 47


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 167 QRRLLNPIYPDLDQRE*LESQTQFLAS 87
           Q R  NP+ PD      L S +++LAS
Sbjct: 907 QNRGTNPLAPDAVDLTQLTSVSEWLAS 933


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 29  IVNDLRDALTEYKMSEDGF 85
           I +D  DAL  Y+ S+D F
Sbjct: 206 IADDRGDALIIYQNSDDSF 224


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 29  IVNDLRDALTEYKMSEDGFLKP 94
           I N L   ++EY M   GFL+P
Sbjct: 336 IRNYLTKFVSEYWMETRGFLQP 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,758
Number of Sequences: 438
Number of extensions: 2374
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)