Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P19
(380 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.08c |cox12||cytochrome c oxidase subunit VIb|Schizosacc... 92 3e-20
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 29 0.33
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 29 0.33
SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 1.7
SPAC1751.03 ||SPAC31A2.01|translation initiation factor eIF3m|Sc... 26 1.7
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 25 3.0
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 25 4.0
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 25 4.0
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 5.3
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 24 7.0
SPBC947.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 24 7.0
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 24 9.3
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 24 9.3
>SPCC1442.08c |cox12||cytochrome c oxidase subunit
VIb|Schizosaccharomyces pombe|chr 3|||Manual
Length = 83
Score = 91.9 bits (218), Expect = 3e-20
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 104 RFPNQNQTRYCYQSYLDFHRCQKVRGKKYDPCYYFQRVYKSMCPNEWVDKWDNQRAEGTF 283
RFPN NQT++C+QSY+D+ RC K +G+ + PC F Y+S+CP EWV++WD QR GTF
Sbjct: 20 RFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTF 79
Query: 284 AGRI 295
I
Sbjct: 80 PAPI 83
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 28.7 bits (61), Expect = 0.33
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 14 EFEEKALFTLSKM-PEMIKSAADIKTAPFDPRFPNQNQTR 130
+ + L+TLSK P ++K + D APF+ N N R
Sbjct: 43 DIDTSVLYTLSKRKPALVKRSTDASYAPFNVTCSNDNLLR 82
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 28.7 bits (61), Expect = 0.33
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 14 EFEEKALFTLSKM-PEMIKSAADIKTAPFDPRFPNQNQTR 130
+ + L+TLSK P ++K + D APF+ N N R
Sbjct: 43 DIDTSVLYTLSKRKPALVKRSTDASYAPFNVTCSNDNLLR 82
>SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 1.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 231 VPTSGSTNGTTSARREPSPAGFKLFQS 311
+P+ G +N ++S R AGF LF+S
Sbjct: 194 LPSGGLSNLSSSLRSSSKSAGFSLFES 220
>SPAC1751.03 ||SPAC31A2.01|translation initiation factor
eIF3m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 402
Score = 26.2 bits (55), Expect = 1.7
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 127 EVLLSELFRLPSMPEGPRQEVRPVLLFPAGLQVHVSQRVGRQMGQPARG-GNLRRQDLNY 303
EVL L RLP + + P +E+ P+L L + S + + + + Q+ N
Sbjct: 51 EVLNLFLTRLPLLAQAPEKELEPILAVFINL-IQESAAFEDHVSKFCQALEQIADQNNNL 109
Query: 304 SKALL*FITIIFN 342
+ A+L ++I+FN
Sbjct: 110 TPAILSVLSILFN 122
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 25.4 bits (53), Expect = 3.0
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +2
Query: 65 KSAADIKTAPFDPRFPNQNQTRYCYQSYLDFHRCQKVRG-KKYDPCYYFQRVYKSMCPNE 241
++ ++ +++ DP P + + C +Y + +K+RG KKY P + +Y N+
Sbjct: 183 ETQSEKRSSQTDPSLPFKTNSLNCDVTYEEGPLTKKLRGPKKYKPSHSSWDIYGFKKANQ 242
Query: 242 W--VDKWD 259
+ VD+++
Sbjct: 243 FYTVDQYN 250
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.0 bits (52), Expect = 4.0
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = -1
Query: 278 FPPRAGCP--ICR----PTRWDTWTCRPAGNSSTGRTSCRGPS 168
F GC ICR P+++ ++CR A NSS TS G S
Sbjct: 397 FLTNGGCYSYICRSRSCPSKYQCYSCRCARNSSLEFTSLPGQS 439
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 4.0
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 157 PSMPEGPRQEVRPVLLFPAGLQVHVSQRVGRQMGQPARGGNLRRQDLNYSKALL 318
PSM GP+ EV P A L + V Q +G N+ ++ NY+ +L
Sbjct: 457 PSMSNGPKSEVSPSQSQQAPLIQSSTSPVSLQFPPEVQGSNVDKR--NYALNVL 508
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 24.6 bits (51), Expect = 5.3
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 366 LNHIARPIVKNNRNKLQECFGII*ILPAKVPSAR 265
L+H+ + I+ R KL++ G + KVPSA+
Sbjct: 609 LDHVVQAIIHYERFKLRKYLGNMSEFVKKVPSAK 642
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 24.2 bits (50), Expect = 7.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 191 DPCYYFQRVYKSMCPNEWVDKWDNQ 265
DP Y ++ PNEWV +W Q
Sbjct: 379 DPRYIKLFGSNAILPNEWVTEWVEQ 403
>SPBC947.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 103
Score = 24.2 bits (50), Expect = 7.0
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 175 PRQEVRPVLLFPAGLQVHVSQRVGRQMGQPA 267
P+ E+RP L FP L + R+ + Q A
Sbjct: 15 PKDELRPWLSFPKTLDTSIRARLQKMPPQQA 45
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 23.8 bits (49), Expect = 9.3
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 97 RPKVP*PKPDEVLLSELFRLPSMPEGPRQEVRPVLLFPA 213
RP+ P P + L E F ++ E V + +FP+
Sbjct: 424 RPRTPSPSAENYLTQENFDSDNLSESLDNSVENLTVFPS 462
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 23.8 bits (49), Expect = 9.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 298 LNPAGEGSLRALVVPFVDPLVGTHGLVDPL 209
+NP GS+ L+ PF + + TH + PL
Sbjct: 399 MNPILNGSVVRLIHPFTNRNLHTHKIPAPL 428
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,543,267
Number of Sequences: 5004
Number of extensions: 30784
Number of successful extensions: 81
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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