Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P17
(334 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa... 28 0.43
SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog Chs2|Schiz... 27 0.75
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 27 0.75
SPAC56F8.11 |spc3||signal peptidase subunit Spc3 |Schizosaccharo... 26 1.7
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 25 3.0
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 24 5.3
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 24 7.0
SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomy... 23 9.2
SPBC3B9.21 |dcp1||mRNA decapping complex subunit Dcp1|Schizosacc... 23 9.2
SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr ... 23 9.2
>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 422
Score = 27.9 bits (59), Expect = 0.43
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 322 HKFPVYRLESYKRLKWDSTP*VYYSHNHIVSLLKVSYPQLFCFYF 188
H FP YR Y + W +Y +H++ V L+ + CF F
Sbjct: 268 HVFPRYRFCFYGYVLWLCWCTMYLTHHYFVDLVGGMCLAIICFVF 312
>SPBC1709.01 |chs2|SPBC1734.17|chitin synthase homolog
Chs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 926
Score = 27.1 bits (57), Expect = 0.75
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 190 NKSRTAEDKKLLGDSQCGYENNIPMVCCPISNACKTPDDKPGI 318
++S T+ D+ L S Y ++P++C ++ C TP D G+
Sbjct: 162 SQSYTSIDR--LNSSSSHYSKDVPLLCGSLTIDCPTPIDLRGM 202
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.1 bits (57), Expect = 0.75
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 4 HALYTRELYLINSNKMIIFSTVSYILLISVNLIRA 108
H+LY E + + + +S V++ L I VN+IR+
Sbjct: 435 HSLYASESFQHKLDVLTAYSNVTHALEIQVNIIRS 469
>SPAC56F8.11 |spc3||signal peptidase subunit Spc3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 185
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 158 YRDTQFPDSFLGVVQVCARIKF---TDINRIYETVEKIIILLLFIKYNS 21
YR +F +F V Q A++KF D++ +++ K +++ L Y++
Sbjct: 52 YRSARFYHAFRNVRQQYAQVKFNMDADLSELWDWNTKHVVVYLVASYST 100
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.0 bits (52), Expect = 3.0
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 79 LLISVNLIRAQTCTTPRNESGNCVSLYDCEPL-LNLFRNKSRTAEDKKLLGDSQCGYENN 255
++I+ +L Q R+E C + D + + +N + S KLLGD
Sbjct: 119 VVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDVNYGSHHSAIFGYTKLLGDVPGCQAEY 178
Query: 256 IPMVCCPISNACKTPDDKP 312
I + I N CK PDD P
Sbjct: 179 IRVPFAEI-NCCKLPDDIP 196
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 24.2 bits (50), Expect = 5.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -1
Query: 184 INSVKAHNRIGTRNSLIHF*ELYRSVHESNLLIL 83
I ++ +N +GT L HF + H SN+ ++
Sbjct: 82 IKYLREYNCLGTGGGLYHFRDQILKGHTSNVFVM 115
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 23.8 bits (49), Expect = 7.0
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +1
Query: 181 LFRNKSR--TAEDKKLLGDSQCGYENNIPMVCCPIS 282
L R+KSR + +DK +E N+P +CC ++
Sbjct: 34 LLRDKSRVNSFKDKNSTLKIDRLFEENVPHLCCQVT 69
>SPCC1739.06c |||uroporphyrin methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 332 YKPTQIPGLSSGVLQAFEMG 273
Y PT IPG+SS ++ G
Sbjct: 365 YVPTVIPGISSALMAPISAG 384
>SPBC3B9.21 |dcp1||mRNA decapping complex subunit
Dcp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 127
Score = 23.4 bits (48), Expect = 9.2
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 182 KFSKGSQSYRDTQFPDSFLGVVQVCARIKFTDINRIYETVEKIIILLLFIKYNSRVY 12
+F GSQ + T +F V AR+ + +NR + E L LFI + S V+
Sbjct: 37 QFDVGSQKWLKTSIEGTFFLVKDQRARVGYVILNR--NSPEN---LYLFINHPSNVH 88
>SPBC1683.02 |||adenine deaminase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 339
Score = 23.4 bits (48), Expect = 9.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 247 ENNIPMVCCPISNACKTP 300
E NIP CP SN P
Sbjct: 239 ERNIPFTVCPFSNEIVYP 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,385,000
Number of Sequences: 5004
Number of extensions: 25783
Number of successful extensions: 55
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 93942212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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