Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P16
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical p...    27   7.6  
Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical p...    27   7.6  
AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical ...    27   7.6  

>Z82096-7|CAB05033.2|  332|Caenorhabditis elegans Hypothetical
           protein ZK909.5 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 191 YSAKDYDTFYKTTVYMKDRVNQDLYIYVLST 283
           YS   Y   +K+ +Y K+R NQ+ YI V+ +
Sbjct: 69  YSETQYWYTFKSDIYRKERTNQEGYIEVMKS 99


>Z81533-3|CAB04335.1|  327|Caenorhabditis elegans Hypothetical
           protein F36G9.5 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +2

Query: 320 IPPIYEVLPEYFNNGEILHTAQRIGVHGSRMIEYYPSTYKWDNSVVIRSNTTVWHYHC 493
           I PI  +   +  NG   H A  I  +GS M+    + + W N+ ++  NT +W   C
Sbjct: 163 IYPILCIAIMFPGNGFCSHVAYPI--YGSIMLRVTDTMFGWTNNYILMFNTFLWVSIC 218


>Z79756-1|CAB02120.2|  494|Caenorhabditis elegans Hypothetical
           protein F53C11.1 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 101 KQNWLLPLSVPFSPLNPTHQFEAVIMFNV 187
           KQN+     V F+PL PTH +  V+ ++V
Sbjct: 280 KQNFPGEKFVSFTPLTPTHAYSNVLAYSV 308


>Z66519-6|CAA91374.3|  394|Caenorhabditis elegans Hypothetical
           protein B0334.6 protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = +2

Query: 119 PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHR 298
           PLS+P    + +  F       VLY      TFYK++V +    N + Y+ V+  L+ HR
Sbjct: 102 PLSIPSLAFSTS--FNHFYSRIVLYIRTLASTFYKSSVLIVVAFNIERYLCVVCPLNSHR 159


>Z81557-14|CAN99712.1|  321|Caenorhabditis elegans Hypothetical
           protein F59A1.11b protein.
          Length = 321

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 80  KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 223
           +++I+ KK   LL  +++P   + P    +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183


>Z81557-13|CAB04530.2|  303|Caenorhabditis elegans Hypothetical
           protein F59A1.11a protein.
          Length = 303

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 80  KIWILMKKQNWLL-PLSVPFSPLNPTHQFEAVIMFNVLYSAKDYDTFYK 223
           +++I+ KK   LL  +++P   + P    +AVI + V+ S +D + F+K
Sbjct: 137 RLFIIKKKSLVLLYSIAIPLMLIGPIS--DAVIAYPVILSGQDMNVFFK 183


>AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical
           protein Y47H9C.1 protein.
          Length = 377

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 182 NVLYSAKDYDTFYKTTVYMKDRVNQDLYIYVLSTLHIHRSDLEGYAI-PPIY 334
           N+  SA+  DT +  +VY+    N    + ++     +  +++GY + PP Y
Sbjct: 42  NIYISAQSDDTSFLASVYIVTAKNSKSLLNIMQDNLQNTGEIQGYPVDPPAY 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,839,598
Number of Sequences: 27780
Number of extensions: 255043
Number of successful extensions: 608
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)