Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P14
         (396 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL137661-1|CAB70863.1|  661|Homo sapiens hypothetical protein pr...    29   7.4  
AK075278-1|BAC11515.1|  429|Homo sapiens protein ( Homo sapiens ...    29   7.4  
AC098818-1|AAY40926.1|  662|Homo sapiens unknown protein.              29   7.4  
AB126942-1|BAD02485.1|  622|Homo sapiens hypothetical protein pr...    28   9.7  

>AL137661-1|CAB70863.1|  661|Homo sapiens hypothetical protein
           protein.
          Length = 661

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 260 EFGNHSELGSIRDGSRPEI 204
           EFGNH   G++R G+ PEI
Sbjct: 418 EFGNHRPKGALRPGNGPEI 436


>AK075278-1|BAC11515.1|  429|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90797 fis, clone THYRO1001770, weakly similar to
           PROBABLE SERINE/THREONINE-PROTEIN KINASE YNL020C (EC
           2.7.1.-). ).
          Length = 429

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 260 EFGNHSELGSIRDGSRPEI 204
           EFGNH   G++R G+ PEI
Sbjct: 170 EFGNHRPKGALRPGNGPEI 188


>AC098818-1|AAY40926.1|  662|Homo sapiens unknown protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 260 EFGNHSELGSIRDGSRPEI 204
           EFGNH   G++R G+ PEI
Sbjct: 403 EFGNHRPKGALRPGNGPEI 421


>AB126942-1|BAD02485.1|  622|Homo sapiens hypothetical protein
           protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 115 SQSGDLHEYKIQKADRKQREFIY*QERMEQISGREPSRMDPNSEWLPNSIPFG 273
           S  GDL E   + ++ K REFI   +    I+   PSR +   E   N   FG
Sbjct: 75  SIQGDLEEDSNRLSESKLREFIEKLKINHLITNHSPSRFNLTKECNDNEAAFG 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,542,729
Number of Sequences: 237096
Number of extensions: 1249602
Number of successful extensions: 5818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5818
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)