Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P12
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.14 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   0.55 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   2.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.9  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   5.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   5.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   5.1  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   6.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +3

Query: 282  RPHRDD-DPDQGQGQVHHRPHLGRWTLAQI 368
            +PH  D +P  G   +H++P  G W   QI
Sbjct: 1417 KPHESDVEPIHGY-TIHYKPEFGDWETVQI 1445


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 368 YLSQGPAAEMWSVVHLPLTLIRIVISVRSFPS 273
           Y + GP    WS V  P T++   I+  S  S
Sbjct: 297 YSAPGPTYSTWSTVQTPTTVMSPTINCWSLTS 328


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 21/102 (20%), Positives = 39/102 (38%)
 Frame = +1

Query: 64  LDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQVDVSPKSDR 243
           +DF+  +  L    GK+    +  AD L     D G+ +YE+P         +V+   + 
Sbjct: 5   MDFDTRTVRLRNRVGKR--KGNVVADILSRYPSD-GEASYEYPREQPIVAMFEVNNTPEI 61

Query: 244 LQLLAPFDKWDGNDLTEMTILIKVKGKCTTDHISAAGPWLKY 369
           LQL++   +   +D     I+   +             W +Y
Sbjct: 62  LQLMSDLKQHQSDDPVLSQIIANKQSGAAAPDARTQRVWSQY 103


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 128 IRSRTNCPRKVSTPV 172
           I    +CPRK STP+
Sbjct: 52  IEGLRDCPRKYSTPL 66


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 128 IRSRTNCPRKVSTPV 172
           I    +CPRK STP+
Sbjct: 48  IEGLRDCPRKYSTPL 62


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 105 WEEIQVIRSVRGR 143
           W++++++RS  GR
Sbjct: 113 WDKVEIVRSQEGR 125


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 205 CRLRGGVRTYPDRGRNLSRAVRPRT 131
           C L G  R  PD  + L+ A+  +T
Sbjct: 217 CALNGFARGIPDTSKQLAAALGMQT 241


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 205 CRLRGGVRTYPDRGRNLSRAVRPRT 131
           C L G  R  PD  + L+ A+  +T
Sbjct: 215 CALNGFARGIPDTSKQLAAALGMQT 239


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 205 CRLRGGVRTYPDRGRNLSRAVRPRT 131
           C L G  R  PD  + L+ A+  +T
Sbjct: 217 CALNGFARGIPDTSKQLAAALGMQT 241


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 285 PHRDDDPDQGQGQVHHR 335
           PH + + D G G  H R
Sbjct: 75  PHPETEKDWGDGDKHDR 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,499
Number of Sequences: 336
Number of extensions: 2529
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)