Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P12
(439 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 187 6e-49
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 144 5e-36
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.18
SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subun... 28 0.55
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.3
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 1.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 2.2
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 26 2.2
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 2.9
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 26 2.9
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 5.1
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 25 5.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 8.9
SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 8.9
SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr 1... 24 8.9
SPAPB8E5.04c |||phosphatidylglycerol/phosphatidylinositol transf... 24 8.9
SPBC15D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 24 8.9
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 187 bits (456), Expect = 6e-49
Identities = 88/145 (60%), Positives = 101/145 (69%)
Frame = +1
Query: 1 PATHCFVTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDT 180
PATH FVTSP++VTA+ +G ++FNPL+D L DG FK P LPSKG+DPG +T
Sbjct: 480 PATHAFVTSPDIVTAMVFSGDMNFNPLTDTLKDKDGNDFKFEPPTGAGLPSKGYDPGSNT 539
Query: 181 YEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCTTDHISAAGPW 360
Y P + K V + P S RLQ L PF KWDG D+ + ILIK KGKCTTDHISAAGPW
Sbjct: 540 YVAPSSVNVK-DVAIDPHSKRLQRLTPFKKWDGKDMKGLKILIKAKGKCTTDHISAAGPW 598
Query: 361 LKYRGHLDXISNNMFITATNAENGE 435
LKYRGHL ISNN I A NAENGE
Sbjct: 599 LKYRGHLQNISNNYMIGAINAENGE 623
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 144 bits (349), Expect = 5e-36
Identities = 71/148 (47%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +1
Query: 1 PATHCFVTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDT 180
P+T F+TSP +V A + L F+P D L DGK FK P ELPS GF G +
Sbjct: 488 PSTMNFLTSPVIVAAKIFSSDLAFDPTHDTLQTPDGKAFKFRPPQGVELPSAGFIAGDSS 547
Query: 181 Y--EHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCTTDHISAAG 354
Y E P + +V + PKSDRL+ L PF+ + G ++ + + +KVKGKCTTDHISAAG
Sbjct: 548 YIPEPNPQPVPETEVTIDPKSDRLEALEPFEPYQGGEMENLKVAVKVKGKCTTDHISAAG 607
Query: 355 PWLKYRGHLDXISNNMFITATNAENGEL 438
WLKY+GHL I NN I A NA GE+
Sbjct: 608 KWLKYKGHLSNICNNTLIGAMNAATGEV 635
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.18
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = -3
Query: 377 CPLYLSQGPAAEM-WSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDTSTCTLLP 201
CP Y S ++ WSV +++ +S S S S ++S S T+T
Sbjct: 99 CPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSS 158
Query: 200 SAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S+ S S S SSS++ S + + S SSS + S ++ +TSS
Sbjct: 159 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSV--PITSS 213
Score = 27.5 bits (58), Expect = 0.96
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = -3
Query: 257 ANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDN 78
++S S S +S+ + S+ S S S SSS++ S + + SVP++SS +
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTS 215
Query: 77 GLKSRRPAIDRAVTSS 30
S + + +SS
Sbjct: 216 SSHSSSSSSSSSSSSS 231
>SPAC4G9.08c |rpc2||DNA-directed RNA polymerase III complex subunit
Rpc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1165
Score = 28.3 bits (60), Expect = 0.55
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 393 GDVIEMPPVFEPGSSGRDVVGGALALDLDQDRHLGEVVPVPLVEGRQQLQP 241
GD + P G G+D GAL + + + L + PVP +E + QL P
Sbjct: 7 GDPQKSQPKINKGGIGKDESFGALFKPVYKGKKLAD--PVPTIEDKWQLLP 55
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 1.3
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -3
Query: 266 SKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANG--SDNLNFFPSVPV 93
S A+ S S TS+ + P++ S+ S SSS++G S +L+ SVP
Sbjct: 93 SSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPS 152
Query: 92 SSS 84
SSS
Sbjct: 153 SSS 155
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 112 KFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQVDVSPKSDR 243
K++ +D F PS+ P D+Y P G K+ +S KS +
Sbjct: 118 KYESTDSFPSSQPSRANSPQSDSYSSPYEKG-KLFPKISLKSSK 160
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 2.2
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 49 SIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYE 186
S +G D + S+ + ++ +K + ++P ++E P+K P QD+ E
Sbjct: 216 SESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNE 261
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 26.2 bits (55), Expect = 2.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3
Query: 350 AAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDF 231
A E W VH P T++ VIS+ S P+ S AN + +F
Sbjct: 107 AGERWLPVHSPETILISVISMLSSPNDESP-ANIDAAKEF 145
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 105 WEEIQVIRSVRGRTALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQAATV 254
W ++ R T ER RSG + P R+R+ S V+ + + T+
Sbjct: 58 WITVEEERDYLVSTICERIAERSGRLAAPTRKREFSLSNGVSVVLREPTM 107
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -3
Query: 167 GSKPFEGSSSANGS-DNLNFFPSVPVSSSDNGLKSRRP 57
G+ F+ S G+ D + F PS+P SS G R P
Sbjct: 407 GAAYFDPSKMNQGTGDGVPFSPSMPSGSSRGGYHGRNP 444
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 5.1
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 83 RMN*PVLMGRNSSYQIRSRTN---CPRKVSTPVRIRTNTPPQT 202
R++ P L N+S S T P TPVR +N PP T
Sbjct: 63 RLSKPSLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKPPLT 105
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.0 bits (52), Expect = 5.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 91 LTGTDGKKFKLSDPFADELPSKGFDPGQDTYEH 189
L+ + ++FK S+ F D + G+ P T+ H
Sbjct: 861 LSSSFARQFKSSNLFCDNMKMLGYIPRASTFAH 893
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 8.9
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S +S S S TST + + S+ S S P S SSS++ S + +
Sbjct: 261 STASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSS--SSPTSTSSTISSSSSSSSSFS 318
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SS + S + ++SS
Sbjct: 319 STLSSSSMSSSSSFSSSPTSSSSTISSS 346
>SPAC1805.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 527
Score = 24.2 bits (50), Expect = 8.9
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +1
Query: 172 QDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCTTDH 339
+D + P D SK +PK+ LL +D + T +LIK C H
Sbjct: 69 KDILKEQPTD-SKSTTSSAPKNSPFSLLESYDCLQVDTATVQKVLIKRPEGCRELH 123
>SPAC4F8.07c |hxk2||hexokinase 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 455
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 274 DGNDLTEMTILIKVKGKCTTDHISAAGPW 360
+G + +M + K+ GKCT DH+ W
Sbjct: 225 NGAYVEQMNQIPKLAGKCTGDHMLINMEW 253
>SPAPB8E5.04c |||phosphatidylglycerol/phosphatidylinositol transfer
protein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 414 RGDEHIVGDVIEMPPVFEPGSSGRDV 337
RGD+H+V D I + P P ++G+++
Sbjct: 58 RGDDHVVVDYINLIP--NPPAAGKNL 81
>SPBC15D4.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 226 SPKSDRLQLLAPFDKWDGNDLTEMTILIKV 315
SP+ ++ P DK +GNDL +KV
Sbjct: 95 SPQEAKVLYATPVDKHNGNDLQAFCEWLKV 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,855,275
Number of Sequences: 5004
Number of extensions: 40339
Number of successful extensions: 125
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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