Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P12
(439 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0084 - 16386962-16387033,16387124-16387175,16387252-163873... 31 0.40
02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253 30 0.93
08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252 29 1.2
07_03_1706 + 28855669-28855801,28856013-28856044,28856158-288562... 29 1.6
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 29 2.2
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 29 2.2
12_01_1062 - 10966940-10967140,10967314-10967413,10968069-109681... 28 3.8
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 28 3.8
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 3.8
05_04_0101 - 18003528-18003655,18003951-18003997,18004046-180040... 28 3.8
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369... 28 3.8
11_04_0278 + 15711441-15711714,15712272-15712307,15713078-15713283 27 5.0
11_03_0122 - 10313934-10314069,10315889-10316319 27 5.0
07_03_1794 - 29580767-29584189 27 5.0
04_01_0246 + 3225743-3226473,3226493-3226624,3227580-3227670,322... 27 5.0
06_01_0346 - 2499108-2499348,2499659-2499864,2499970-2500152,250... 27 6.6
04_01_0223 + 2813129-2814014,2815928-2816309,2816358-2816459,281... 27 6.6
02_05_0603 - 30295130-30295389,30296840-30296987 27 6.6
02_02_0617 - 12184745-12185008,12185352-12185451,12186585-121866... 27 6.6
01_01_0920 + 7264498-7264573,7264705-7264745,7265339-7265408,726... 27 6.6
01_01_0453 - 3361460-3361549,3361660-3361846,3362038-3362139,336... 27 6.6
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 24 7.4
11_06_0368 + 22756988-22758205 27 8.7
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 27 8.7
04_04_0665 - 27082142-27082480 27 8.7
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 27 8.7
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144... 27 8.7
>06_03_0084 -
16386962-16387033,16387124-16387175,16387252-16387313,
16387509-16387543,16387637-16387679,16388610-16388692,
16388829-16388917,16390415-16390681,16391370-16391446,
16391546-16391677,16391802-16391870,16392464-16392529,
16392603-16392773,16392848-16392916,16393005-16393086,
16393175-16393219,16393535-16393659,16394271-16394525,
16396561-16396722
Length = 651
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 95 PVLMGRNSSYQIRSRTNCPRKVSTPVRIRTNTPPQTAARYKWTCHRNRTG 244
P + + S++ S + P V +P R N P + K TC+RNR+G
Sbjct: 473 PSNLVNSGSHKFLSGSLIPEHVLSPYRNVGNDPARNECHQKNTCNRNRSG 522
>02_03_0160 - 15826050-15826462,15826870-15827140,15827242-15827253
Length = 231
Score = 29.9 bits (64), Expect = 0.93
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +1
Query: 67 DFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQVDVSPKSD 240
D +P D G D SDP D PS DP D + P+D + V D S +D
Sbjct: 144 DDSPADDHADGPD-PAVDPSDPAVDADPSDPADPADDADDSDPSDPA-VDADPSDPAD 199
>08_02_1377 + 26530653-26530988,26533137-26533999,26534739-26535252
Length = 570
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 189 PPRRRQQGTSGRVTEIGQAATVGALRQVGRERPHRDDD 302
P RQ+ + T++ QAA VGA+R R+ P R +D
Sbjct: 291 PASERQKRIAELQTKLFQAAAVGAVRVKRRKGPRRGED 328
>07_03_1706 +
28855669-28855801,28856013-28856044,28856158-28856229,
28856631-28856727,28857195-28857256,28857726-28858024,
28858306-28858663,28858692-28859297,28859500-28859698,
28860039-28860101,28860603-28860673
Length = 663
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 162 RPRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVH 329
R +SGYV T RRRQ+ + +A G + + ++ P + + G Q H
Sbjct: 41 RSQSGYVTTDERRRQEVVLPEFHHVEKADGDGTVNGLNQDAPKKTPKVNSGGLQKH 96
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 RRQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPD--QGQGQVHH 332
R+ QG GR+ +G+A + + R + +P GQGQVHH
Sbjct: 68 RQLQGRGGRIPRVGRALPLLTVDDFHRFLFSHELNPPIRHGQGQVHH 114
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 71 STRCRMN*PVLMGRNSSYQIRSRTNCPRKVSTPVRIRTNTPPQTAAR 211
S RCR + P + R + IR R+ +P+R R+ +PP R
Sbjct: 279 SPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGSPIRRRSPSPPPRRLR 325
>12_01_1062 -
10966940-10967140,10967314-10967413,10968069-10968132,
10968301-10968373,10968467-10968612,10969625-10969667,
10969712-10969902,10970706-10970892,10971225-10971384,
10971483-10971616,10972525-10972530
Length = 434
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 138 GRTALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQVGRERPH 290
G + F+ +S Y PP R + GT IG + L Q+G ++ H
Sbjct: 316 GEMIADVFQDKSTYAE-PPSRFEAGTPAIGEAIGLGTAIDYLSQIGMQKIH 365
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -2
Query: 420 VRRGDEHIVGDVIEMPPVFEPGSSGRDVVGGALALDLDQDRHLGEVVPVPLVE 262
+RRG E + DV PPV S ++ + L+Q LGE V E
Sbjct: 104 IRRGRERLAQDVAVPPPVIGKTSEQLSIIEEKVKKLLEQIEELGEAGKVDEAE 156
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 27.9 bits (59), Expect = 3.8
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -3
Query: 275 SHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPS-- 102
S G+NS S+ G +S SA S GS GSSS++GS +++ S
Sbjct: 238 SSSGSGSNSNSIGGSGSSSGAGSGSSASSGYGGSSSGSMSGSGSSSSSGSTGMSYGSSGA 297
Query: 101 VPVSSSDNGLKSRRPAIDRAVTSSG 27
S S +G S ++ A + +G
Sbjct: 298 GSFSGSSSGSNSNAGSMSGANSGAG 322
>05_04_0101 -
18003528-18003655,18003951-18003997,18004046-18004077,
18004316-18004453,18004579-18004619,18004967-18005105,
18010981-18011057,18011804-18011858,18012976-18013021,
18013099-18013187,18013304-18013417
Length = 301
Score = 27.9 bits (59), Expect = 3.8
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 114 IQVIRSVRGRT-ALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQVGRERPH 290
+Q + G T A++R P+ VR PPRR QG G AAT R P
Sbjct: 108 MQETHELDGTTVAVDRATPKDEDVRHPPRRVVQGGYGAYNAYITAAT----RYAALGTPT 163
Query: 291 RDDDPDQGQG-QVHHRPH 341
D P G +V R H
Sbjct: 164 SYDHPGPAYGNRVAQRSH 181
>05_03_0626 -
16335816-16335917,16336331-16336558,16336694-16336973,
16337596-16338560
Length = 524
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 108 EEIQVIRSVRGRTALERFR--PRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQV 272
E + + G A++R + PR+G TP + GTSG +T+ +T A+ V
Sbjct: 400 EVLSQVYDAYGAVAVQRAQLFPRNGADVTPTKSSASGTSGTITKPVAESTAVAVEHV 456
>11_04_0278 + 15711441-15711714,15712272-15712307,15713078-15713283
Length = 171
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +1
Query: 169 GQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCT 330
G ++ HP A + P + PFD + L +++K K +CT
Sbjct: 40 GATSWIHPTAPSENRALMSKPARKAKKQWCPFDDMSSHSLDGCNVMLKDKAECT 93
>11_03_0122 - 10313934-10314069,10315889-10316319
Length = 188
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 268 CRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDR 167
CR P + P+ +P VP CR TYPD+
Sbjct: 132 CRPPPPLLVLPVRYWQPAVPRCR----STTYPDK 161
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 262 FDKWDGNDLTEMTILIKVKGKCTTDHISAAGPWLKYRG 375
F D D+T ++ ++ G+ T+D IS + P ++RG
Sbjct: 385 FGSIDPEDMTSLSAAVENDGEITSDDISTSLPEEEFRG 422
>04_01_0246 +
3225743-3226473,3226493-3226624,3227580-3227670,
3228617-3229074,3229342-3229864
Length = 644
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 139 DELPSKGFDPGQDTYEHPPADGSKVQVDVSPKSDRL 246
D + FD DT+E P G + +DVS +D +
Sbjct: 164 DRFVAVEFDTYDDTFERPRPAGDHIGIDVSSVADSI 199
>06_01_0346 -
2499108-2499348,2499659-2499864,2499970-2500152,
2500682-2500819,2501482-2501566,2504910-2504967,
2505360-2505441,2506331-2506462,2506547-2506647,
2507850-2507898
Length = 424
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 121 LSDPFADELP--SKGFDPGQDTYEHPPADGS 207
++DP+ P S G DP D HPP++GS
Sbjct: 1 MADPYRAYAPPSSLGRDPQGDFPRHPPSEGS 31
>04_01_0223 +
2813129-2814014,2815928-2816309,2816358-2816459,
2816727-2817249
Length = 630
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 160 FDPGQDTYEHPPADGSKVQVDVSPKSDRL 246
FD DT+E P G + +DVS +D +
Sbjct: 172 FDTYDDTFERPRPAGDHIGIDVSSVADSI 200
>02_05_0603 - 30295130-30295389,30296840-30296987
Length = 135
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 204 QQGTSGRVTEIGQAATV--GALRQVGRERPHRDDDPDQGQGQVH 329
Q GR+ G+A V G +++ +++ HR++ + G G++H
Sbjct: 5 QNVVGGRLKLKGKALDVKEGGVKKKKKKKQHREESSEAGHGELH 48
>02_02_0617 -
12184745-12185008,12185352-12185451,12186585-12186653,
12187988-12188037
Length = 160
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 309 DQDRHLGEVVPVPLVEGRQQLQPV 238
D+++H+ V P+ L GRQ+ QP+
Sbjct: 74 DEEKHMLAVQPIGLDGGRQRTQPI 97
>01_01_0920 +
7264498-7264573,7264705-7264745,7265339-7265408,
7265500-7265648,7266143-7266238,7266326-7266396,
7266510-7266571,7266651-7266714,7267608-7267692,
7267777-7267903,7268016-7268080,7268739-7268796,
7268927-7269066,7269624-7269693,7269910-7269981,
7270188-7270234,7270468-7270566
Length = 463
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 146 CPRKVSTPVRIRTNTPPQTAARYKWTCH 229
C +K+STP+ + + P A Y CH
Sbjct: 229 CEKKISTPIEVLCKSCPVEFASYFHYCH 256
>01_01_0453 -
3361460-3361549,3361660-3361846,3362038-3362139,
3362239-3362306,3362976-3363175,3363253-3363595,
3363837-3363893,3364011-3364727,3364805-3365007,
3365171-3365297
Length = 697
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 114 IQVIRSVRGRTALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQA 245
+ VI G + ER+ PR G+ PR R + S V +G +
Sbjct: 562 LYVIGGYDGNMSAERYDPREGFWTQLPRMRTRRGSHSVVVLGDS 605
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 162 RPRSGYVRTPPRRRQQGTSGR 224
R RS R P RRRQ+G GR
Sbjct: 69 RQRSDEAR-PERRRQEGAGGR 88
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 210 GTSGRVTEIGQAATVGALR 266
G R +G AAT+GA R
Sbjct: 104 GEGARAAVLGGAATIGARR 122
>11_06_0368 + 22756988-22758205
Length = 405
Score = 26.6 bits (56), Expect = 8.7
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 120 VIRSVRGRTALERFRPRSGYVRTPPRRR---QQGTSGRVTEIGQAATVGALRQVGRERPH 290
V R +RGR R R R G P+ QQ G E G AA GA + E
Sbjct: 111 VCRLMRGRGRRGR-RRRGGRNALAPQEAPLTQQPQQG--DEEGGAA--GAA--MAAEEVE 163
Query: 291 RDDDPDQGQGQVHH 332
DDD D G G VHH
Sbjct: 164 GDDDDDDGGGGVHH 177
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 356 GPAAEMWSV--VHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDTSTCTLLP 201
GPA +MWSV + L + ++ ++ P LSK + C D + T +P
Sbjct: 209 GPAVDMWSVGCIFAELLNGKPILPGKNEPEQLSKIFDVCGTPDESNWPGVTKMP 262
>04_04_0665 - 27082142-27082480
Length = 112
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -2
Query: 408 DEHIVGDVIEMPP--VFEPGSSGRDVV 334
+EH + D + P V E GSSGRD+V
Sbjct: 18 EEHYIDDANHLVPNSVQEEGSSGRDIV 44
>04_04_0200 - 23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 26.6 bits (56), Expect = 8.7
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = -3
Query: 359 QGPAAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSY 180
Q P + V+H P +++ VI + P H S S L +T ++ + +
Sbjct: 1140 QKPYRNLLPVMHHPSYMMKEVIMIDDSPEHRSDPQISMLLPSAPSPATISVPNTVASRPF 1199
Query: 179 VS*PGSKPFEGSSSANGSDNL--NFFPSVPVSSSDNG 75
P SA G + N P V VSSS G
Sbjct: 1200 YCLPSQNQLLPRESAVGPLPVFTNINPIVGVSSSSQG 1236
>02_03_0205 -
16411707-16412759,16413077-16413256,16413960-16414498,
16414798-16414825
Length = 599
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = -3
Query: 380 RCPLYLSQGPAAEMWSVV--HLP-LTLIRIVISVR--SFPSHLS 264
RCPL L + E WS++ HLP T +I+++ R S H S
Sbjct: 122 RCPLVLDDVLSIEEWSLIQPHLPNETNTKIIVTTREASIAEHCS 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,697,791
Number of Sequences: 37544
Number of extensions: 329823
Number of successful extensions: 866
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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