Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P12
(439 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16) 136 1e-32
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 33 0.14
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 32 0.24
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.96
SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25) 30 0.96
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 29 1.3
SB_16071| Best HMM Match : DUF939 (HMM E-Value=1.2) 29 1.3
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_31509| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_42961| Best HMM Match : DNA_mis_repair (HMM E-Value=1.8e-19) 29 2.2
SB_37122| Best HMM Match : rve (HMM E-Value=1.3) 29 2.2
SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15) 29 2.2
SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 27 5.1
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 27 5.1
SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) 27 5.1
SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.9
SB_45137| Best HMM Match : Involucrin2 (HMM E-Value=0.59) 27 8.9
SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.9
SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_5031| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_17736| Best HMM Match : Aconitase (HMM E-Value=5.2e-16)
Length = 391
Score = 136 bits (328), Expect = 1e-32
Identities = 68/105 (64%), Positives = 79/105 (75%)
Frame = +1
Query: 34 LVTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKV 213
+VTALSIAG L FNP +D LTG DGK FKL P+ DELPS+GFDPG+DTY+ +
Sbjct: 221 IVTALSIAGNLAFNPETDTLTGKDGKPFKLDSPYGDELPSQGFDPGEDTYQ-----VCLL 275
Query: 214 QVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCTTDHISA 348
+S S RLQLL+PFD WDG DL +MT+LIKVKGKCTTDHISA
Sbjct: 276 NHGLS-FSQRLQLLSPFDVWDGKDLDDMTVLIKVKGKCTTDHISA 319
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 241 CPISVTRPLVPCCRLRGGVRTYPDRGRNLSRAVRPRTD 128
CPI V RPL L GG + D GR L R ++ D
Sbjct: 234 CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDIKRTVD 271
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 31.9 bits (69), Expect = 0.24
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 103 DGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKV 213
DG KFK + AD G + +D + PP D SKV
Sbjct: 557 DGGKFKAGESTADSHEDSGKEQEEDASKVPPTDASKV 593
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 29.9 bits (64), Expect = 0.96
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = -3
Query: 308 IRIVISVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANG 129
+ + I+V S S S +N+ S S +S+ S+ S S S SSS++
Sbjct: 38 VAVAIAVSSSSSRSSSNSNNSSNSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSS 97
Query: 128 SDNLNFFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S + + S SSS + S + + +SS
Sbjct: 98 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 130
Score = 28.7 bits (61), Expect = 2.2
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S ++S S S +S+ + S+ S S S SSS+N S + +
Sbjct: 165 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSS 224
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SSS N S + + +SS
Sbjct: 225 SSSSSSSSSSSNNSSSSSSSSSSSSSSS 252
Score = 26.6 bits (56), Expect = 8.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S ++S S S +S+ + S+ S S S SSS++ S + +
Sbjct: 93 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 152
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SSS N S + + +SS
Sbjct: 153 SSSSSSSSSSSNSSSSSSSSSSSSSSSS 180
Score = 26.6 bits (56), Expect = 8.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S ++S S S +S+ + S+ S S S SSS++ S + N
Sbjct: 105 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSN 164
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SSS + S + + +SS
Sbjct: 165 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 192
Score = 26.6 bits (56), Expect = 8.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S ++S S S +S+ + S+ S S S SSS++ S N +
Sbjct: 107 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSS 166
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SSS + S + + +SS
Sbjct: 167 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Score = 26.6 bits (56), Expect = 8.9
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -3
Query: 293 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
S S S S ++S S S +S+ + S+ S S S SSS+N S + +
Sbjct: 111 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNSSSSSS 170
Query: 113 FFPSVPVSSSDNGLKSRRPAIDRAVTSS 30
S SSS + S + + +SS
Sbjct: 171 SSSSSSSSSSSSSSSSSSSSSSSSSSSS 198
>SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 640
Score = 29.9 bits (64), Expect = 0.96
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 DGKKFKLSDPFADELPSKGFDPGQDTYEHPPADG-SKVQVDVSPKSDRLQLLAPFDKWD 276
+G F D + + +GFDP + T HP A+G S+ + + K++R+ L DK++
Sbjct: 359 NGPPFNSGD-YEEFAKEEGFDPHRITPGHPRANGESEKFMQILNKTERIATLEGKDKYE 416
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 DGKKFKLSDPFADELPSKGFDPGQDTYEHPPADG-SKVQVDVSPKSDRLQLLAPFDKWD 276
+G F D + + +GFDP + T HP A+G S+ + + K++R+ L DK++
Sbjct: 1022 NGPPFNPGD-YEEFAKEEGFDPHRITPGHPRANGESEKFMQILNKTERIATLEGKDKYE 1079
>SB_16071| Best HMM Match : DUF939 (HMM E-Value=1.2)
Length = 545
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 150 LERFRPRS-GYVRTPPRRRQQGTSGR-VTEIGQAATVGALRQVGRERPH 290
L R P++ GYVR P + +Q+ SGR +T +A + A + R H
Sbjct: 450 LLRLEPKAPGYVREPVKSKQKNESGRTITSTAEAESALAALEALRSNKH 498
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.5 bits (63), Expect = 1.3
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 103 DGKKFKLSDPFADELPSKGFDPGQDTYEHPPADG-SKVQVDVSPKSDRLQLLAPFDKWDG 279
+G F D + + +GFDP + T HP A+G S+ + + K++R+ L DK
Sbjct: 1180 NGPPFNSGD-YEEFAKEEGFDPHRITPGHPRANGESEKFMQILNKTERIATLEGKDKSTP 1238
Query: 280 NDLTEMTILIKVKG 321
+ T +T ++G
Sbjct: 1239 HPATGVTPYEAMRG 1252
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P C V+AC + R +VP CR RG V DRG
Sbjct: 522 PACDDTGMVSACGV---RGMVPACRDRGMVSACRDRG 555
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 441 PACRDIGMVPACR---DRGMVPACRDRGMVPACRDRG 474
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 450 PACRDRGMVPACR---DRGMVPACRDRGMVPACRDRG 483
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 459 PACRDRGMVPACR---DRGMVPACRDRGMVPACRDRG 492
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 468 PACRDRGMVPACR---DRGMVPACRDRGMVPACRDRG 501
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 477 PACRDRGMVPACR---DRGMVPACRDRGMVPACRDRG 510
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRG 164
P CR V AC R +VP CR RG V DRG
Sbjct: 486 PACRDRGMVPACR---DRGMVPACRDRGMVPACRDRG 519
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -1
Query: 274 PTCRRAPTVAACPISVTRPLVPCCRLRGGVRTYPDRGRNLSRAVR 140
P CR V AC R +VP CR RG V D G + VR
Sbjct: 495 PACRDRGMVPACR---DRGMVPACRDRGMVPACDDTGMVSACGVR 536
>SB_31509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.1 bits (62), Expect = 1.7
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 62 VWTSTRCRMN*PVLMGRNSSYQIRSRTNCPRKVSTPVRIRTNT 190
+ T+TR R+ M N +RSRTN +K++T +R RTN+
Sbjct: 49 ITTNTRSRIKSTWKMTTN----MRSRTNLTKKITTNMRSRTNS 87
>SB_42961| Best HMM Match : DNA_mis_repair (HMM E-Value=1.8e-19)
Length = 727
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 154 KGFDPGQDTYEHPPADGSKVQVDVSPKSDRLQLLAPFDKWDGND 285
K FDPG TYE +++++ SP LAP D GN+
Sbjct: 215 KMFDPGTSTYEVNQKVFTQIKLSPSPTQASHFSLAPGDNPSGNN 258
>SB_37122| Best HMM Match : rve (HMM E-Value=1.3)
Length = 152
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 DGKKFKLSDPFADELPSKGFDPGQDTYEHPPADG-SKVQVDVSPKSDRLQLLAPFDKWD 276
+G F D + + +GFDP + T HP A+G S+ + K++R+ L DK++
Sbjct: 10 NGPPFNSGD-YEEFAKEEGFDPHRITPGHPRANGESEKFMQTLNKTERIATLEGKDKYE 67
>SB_4035| Best HMM Match : DUF1279 (HMM E-Value=0.15)
Length = 1575
Score = 28.7 bits (61), Expect = 2.2
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +1
Query: 19 VTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKL--SDPFADELPSKGFDPGQDTYEHP 192
V S ++V + + G+L L + DG++ + FA E P Q +HP
Sbjct: 241 VASSKVVNDI-LHGKLGKQFLRSSIIQDDGEEEDREGTKEFARECALPKPSPPQPAPKHP 299
Query: 193 PADGSKVQVDVSPKSDRLQLLAPFDK 270
A+ +K V+P ++Q + P +K
Sbjct: 300 CANSNKTHTVVTPDGKKIQCIVPDEK 325
>SB_13949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 108 EEIQVIRSVRGRTALERFRPRSGYVRTPPRRR 203
EEI ++ S RG+ +E+ R + Y + P+++
Sbjct: 636 EEITILCSYRGQKVIEKMRKNNSYGKEIPKKK 667
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 132 VRGRTALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQ 311
+ ALE++ RS R + + GR+ E+ Q A +R + P+ DDP++
Sbjct: 679 INATEALEQWNSRSNQSHADGRNKTEPRMGRLKEVEQNAMEQMIR--NGQGPNDVDDPEE 736
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 158 VSTPVRIRTNTPPQTAARYKWTCHRNRTG 244
V TP ++ T+ R KW CH TG
Sbjct: 840 VITPAKVFRIKSSLTSVRNKWHCHEKNTG 868
>SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08)
Length = 551
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 146 SSSANGSDNLNFFPSVPVSSSDNGL 72
+SSA G DNL SVP +S GL
Sbjct: 390 TSSATGVDNLTHVGSVPTCTSSGGL 414
>SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 146 CPRKVSTPVRIRTNTPPQTAARYKWTCHRN 235
CP +V P +++ NTP + W +N
Sbjct: 201 CPNQVLNPTKVQLNTPKELLYENLWIVDKN 230
>SB_8500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3408
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 350 AAEMWSVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSDFGDTST 216
+A +W VVHL +R+ ++ + P +KG + +D ST
Sbjct: 2282 SAGLWPVVHLQKKDVRVRVNFGTRPFMYAKGGKIRAAADLASDST 2326
>SB_17662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 20 SQVLSSSPPCLLQVVWTSTR 79
+Q+ S + PC LQV W+S R
Sbjct: 47 TQIFSGTTPCELQVRWSSVR 66
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 1806 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 1855
>SB_45137| Best HMM Match : Involucrin2 (HMM E-Value=0.59)
Length = 421
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 279 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 328
>SB_24771| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1387
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 1122 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 1171
>SB_22156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1551
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 623 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 672
>SB_57666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 250 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 299
>SB_19563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -3
Query: 365 LSQGPAAEMWSVVHLPLTLIRI-VISVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAG 192
L+ GPA W+VVH L + + +++ +F C++S G +L G
Sbjct: 46 LTAGPAESCWAVVHAGLVPVTVKMLASEAFDIKKEVALTLCNISYHGPDCLKVVLDCRG 104
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 160 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQL 252
FD G DT +H P+D V DV+P +Q+
Sbjct: 221 FDDG-DTIQHAPSDVGAVIYDVTPAVGTIQV 250
>SB_13410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1984
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 201 RQQGTSGRVTEIGQAATVGALRQVGRERPHRDDDPDQGQGQVHHRPHLGR 350
+Q+GT+G + E + A +Q E+ RD + G + RP R
Sbjct: 1347 QQEGTAGELDEAIEEQAERASQQQQGEQGDRDSQENYANGSIIGRPERNR 1396
>SB_5031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 160 FDPGQDTYEHPPADGSKVQVDVSPKSDRLQL 252
FD G D +H P D S V DV+P LQ+
Sbjct: 107 FDDG-DKIQHDPLDVSAVIYDVTPSRGTLQV 136
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,267,668
Number of Sequences: 59808
Number of extensions: 351730
Number of successful extensions: 963
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 847047381
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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