Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P12
(439 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03350.1 68414.m00314 BSD domain-containing protein contains ... 34 0.036
At4g24240.1 68417.m03479 WRKY family transcription factor contai... 30 0.79
At3g19650.1 68416.m02490 cyclin-related contains weak similarity... 29 1.8
At1g75710.1 68414.m08795 zinc finger (C2H2 type) family protein ... 29 1.8
At1g74360.1 68414.m08615 leucine-rich repeat transmembrane prote... 29 1.8
At2g31220.1 68415.m03813 basic helix-loop-helix (bHLH) family pr... 28 3.2
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik... 28 3.2
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 27 4.2
At5g19060.1 68418.m02266 expressed protein ; expression supporte... 27 4.2
At4g28860.1 68417.m04124 casein kinase, putative similar to case... 27 4.2
At3g10590.1 68416.m01273 myb family transcription factor contain... 27 4.2
At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative ... 27 4.2
At4g28880.1 68417.m04127 casein kinase, putative similar to simi... 27 5.5
At2g43050.1 68415.m05342 pectinesterase family protein contains ... 27 5.5
At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein ... 27 5.5
At2g22420.1 68415.m02658 peroxidase 17 (PER17) (P17) identical t... 27 5.5
At1g52380.1 68414.m05911 Ran-binding protein 1 domain-containing... 27 5.5
At5g62070.1 68418.m07790 calmodulin-binding family protein conta... 27 7.3
At5g11850.1 68418.m01385 protein kinase family protein contains ... 27 7.3
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 27 7.3
At5g38690.1 68418.m04678 expressed protein 26 9.7
At4g39630.1 68417.m05601 expressed protein 26 9.7
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 26 9.7
At3g43610.1 68416.m04640 tubulin family protein 26 9.7
At3g22550.1 68416.m02849 senescence-associated protein-related s... 26 9.7
At3g05400.1 68416.m00590 sugar transporter, putative similar to ... 26 9.7
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 26 9.7
At1g68790.1 68414.m07863 expressed protein 26 9.7
>At1g03350.1 68414.m00314 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 470
Score = 34.3 bits (75), Expect = 0.036
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 19 VTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFD-PGQDTYEHPP 195
VTS + VT +S G L + S+E TD ++ F D P + P QD+ + P
Sbjct: 313 VTSADSVTEVSNVG-LKTDKDSEEKKETDSEEVPEEKSFVDAAPPASDEAPIQDSVK-PT 370
Query: 196 ADGSKVQVDVSPKSD 240
+D + +Q V PKSD
Sbjct: 371 SDEAPIQDSVKPKSD 385
>At4g24240.1 68417.m03479 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 353
Score = 29.9 bits (64), Expect = 0.79
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 167 GSKPFEGSSSANGSDN-LNFFPSVPVSSSDNGLKSRRPAIDRAVTSSG 27
GS ANG+ + +NF PS PVS++++ + S R D SSG
Sbjct: 171 GSSSSSPPMLANGAPSTINFAPSPPVSATNSFMSSHRCDTDSTHMSSG 218
>At3g19650.1 68416.m02490 cyclin-related contains weak similarity to
Cylicin I (Multiple-band polypeptide I)
(Swiss-Prot:P35662) [Bos taurus]
Length = 302
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 261 LRQVGRERPHRDDDPDQGQGQVHHRPH--LGRWTLAQIQGASRXHLQQYVHHRDE 419
L QV R RP+ D + G+V RP G W ++ Q R + HR +
Sbjct: 94 LSQVPRSRPYSQHDDRRSDGKVDRRPTSVRGSWRSSRDQSNRRAGDDEKSQHRKD 148
>At1g75710.1 68414.m08795 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 462
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 251 SCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 114
+CSL G +S C+ LP G C+ + F+G S G++ N
Sbjct: 313 TCSLGARGSSSLCSNLPVCGVCTVI----RHGFQGKSGGGGANVAN 354
>At1g74360.1 68414.m08615 leucine-rich repeat transmembrane protein
kinase, putative similar to brassinosteroid insensitive 1
GB:AAC49810 (putative receptor protein kinase); contains
Pfam profiles: PF00560 Leucine Rich Repeat (17 repeats),
PF00069 Eukaryotic protein kinase domain
Length = 1106
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 277 GNDLTEMTILIKVKGKCTTDHISA 348
GN +MT L+K+ KCT DH A
Sbjct: 1051 GNGAEQMTELLKIGVKCTADHPQA 1074
>At2g31220.1 68415.m03813 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 458
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 17 SSQVLSSSPPCLLQVVWTSTRCRMN*PVLMGRNSSYQIRSRTNCPRKVSTPVRIRTNTPP 196
SS + PP QV+ + N V + S + + S +CP+ STP++ N PP
Sbjct: 27 SSFSQAEPPPPPPQVLVAGSTSNSNCSVEVEELSEFHL-SPQDCPQASSTPLQFHINPPP 85
>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
transposon protein GB:AAB95292 GI:2088658 from
[Arabidopsis thaliana]
Length = 1148
Score = 27.9 bits (59), Expect = 3.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 164 SKPFEGSSSANGSDNLNFFPSVPVSSSDNGLKSRRPAIDRAVTS 33
S +GS +++G D+L+ S+PV S+ + R + TS
Sbjct: 315 SSQSKGSVASSGDDDLHSLQSIPVGGSERAVSKRASLSPNSRTS 358
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1277
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 16 FVTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGF 162
F+ LV + R+ P L +DG +++ P DE+ S GF
Sbjct: 32 FIDESSLVIRTTTGVRISALPAEQSLVDSDGSNSEVTLPAKDEVISDGF 80
>At5g19060.1 68418.m02266 expressed protein ; expression supported
by MPSS
Length = 551
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 2 PLHTASSQVLSSSPPCLLQVVWTSTRCRMN*PVLMGRNSSYQIRSRTNCPRKVSTPVRIR 181
PLH L+S L+ VVW+ C + + R +SY IR T+ P P R++
Sbjct: 14 PLHQWRLSALTSLVFFLIVVVWSIDSCSIRSFIKSWRFNSYSIR-LTSPPSLDLDPTRVK 72
>At4g28860.1 68417.m04124 casein kinase, putative similar to casein
kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 414
Score = 27.5 bits (58), Expect = 4.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 146 CPRKVSTPVRIRTNTPPQTAARYKWTCH 229
C +K+STP+ + + P A Y CH
Sbjct: 229 CEKKISTPIEVLCKSHPVEFASYFHYCH 256
>At3g10590.1 68416.m01273 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 206
Score = 27.5 bits (58), Expect = 4.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 273 GRERPHRDDDPDQGQG 320
G + P DDDP QGQG
Sbjct: 186 GNQNPPDDDDPSQGQG 201
>At2g31320.1 68415.m03824 poly [ADP-ribose] polymerase, putative /
NAD(+) ADP-ribosyltransferase, putative /
poly[ADP-ribose] synthetase, putative similar to
poly(ADP)-ribose polymerase [Zea mays] GI:3928871 ;
contains Pfam profiles PF00644: Poly(ADP-ribose)
polymerase catalytic domain, PF00645: Poly(ADP-ribose)
polymerase and DNA-Ligase Zn-finger region, PF02877:
Poly(ADP-ribose) polymerase, regulatory domain, PF00533:
BRCA1 C Terminus (BRCT) domain
Length = 983
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 259 PFDKWDGNDLTEMTILIKVKGKCTTDHIS 345
PFDK+ D +E + +KVKG+ S
Sbjct: 478 PFDKYKIEDTSESLVTVKVKGRSAVHEAS 506
>At4g28880.1 68417.m04127 casein kinase, putative similar to similar
to casein kinase I, delta isoform [Arabidopsis thaliana]
SWISS-PROT:P42158; contains protein kinase domain,
Pfam:PF00069
Length = 415
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 146 CPRKVSTPVRIRTNTPPQTAARYKWTCH 229
C +K+STP+ + P A Y CH
Sbjct: 229 CEKKISTPIEVLCKNHPVEFASYFHYCH 256
>At2g43050.1 68415.m05342 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 518
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +1
Query: 49 SIAGRLDFNPLSDELTGTDGKKFKLSDPFADE---LPSKG--FDPG 171
S++GR+ ++ LT T+ +KF ++ F D LPS G FDPG
Sbjct: 471 SVSGRVKWSGCHPSLTVTEAEKFTVAS-FIDGNIWLPSTGVSFDPG 515
>At2g29580.1 68415.m03592 zinc finger (CCCH-type) family protein /
RNA recognition motif (RRM)-containing protein similar
to SP|O59800 Cell cycle control protein cwf5
{Schizosaccharomyces pombe}; contains Pfam profile:
PF00076 RNA recognition motif (aka RRM, RBD, or RNP
domain)
Length = 483
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +3
Query: 285 PHRDDDPDQGQGQVHHRPHLGRWTLAQIQGASRXHLQQYVH 407
P D D QG V H L R ++Q Q LQ Y+H
Sbjct: 304 PKPDQDGSNQQGSVAHSGLLPRAVISQQQNQPPPMLQYYMH 344
>At2g22420.1 68415.m02658 peroxidase 17 (PER17) (P17) identical to
SP|Q9SJZ2 Peroxidase 17 precursor (EC 1.11.1.7) (Atperox
P17) (ATP25a) {Arabidopsis thaliana}
Length = 329
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 411 GDEHIVGDVIEMPPVFEPGSSGRDVVGGALALDLDQ 304
GDE++ GD+ P VF+ +D+V G L+ DQ
Sbjct: 233 GDENVTGDLDATPQVFD-NQYFKDLVSGRGFLNSDQ 267
>At1g52380.1 68414.m05911 Ran-binding protein 1 domain-containing
protein / RanBP1 domain-containing protein weak
similarity to SP|Q09717 Ran-specific GTPase-activating
protein 1 (Ran binding protein 1) (RANBP1) (Spi1-binding
protein) {Schizosaccharomyces pombe}; contains Pfam
profile PF00638: RanBP1 domain
Length = 440
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 255 GALRQVGRERPHRDDDPDQGQ 317
GAL+Q+ R+ P DDD D +
Sbjct: 15 GALKQLSRDNPGLDDDDDSAE 35
>At5g62070.1 68418.m07790 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 403
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 131 RSRTNCPRKVSTPVRIRTNTPPQTAARYKWTCH 229
RS N P+ S+ R RT P + + Y W C+
Sbjct: 277 RSTENSPQVGSSGSRRRTPFTPTSRSEYSWGCN 309
>At5g11850.1 68418.m01385 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain; identical
to cDNA MAP3K delta-1 protein kinase GI:2253009
Length = 880
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 PATHCFVTSPELVTALSIAGRLD-FNPLSDELTGTDGKKFKLSD 129
PA+ V+S A + RLD F P+ +LT DG F L +
Sbjct: 49 PASTSSVSSSGFGNASTTMPRLDTFEPVGRDLTAVDGVDFNLME 92
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 26.6 bits (56), Expect = 7.3
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -3
Query: 260 GANSCSLSDFGDTSTCTLLPSAGGCS--YVS*PGSKPFEGSSSANGSDNLNFFPSVPVSS 87
G++S G + + ++ SA G S GS PF GSSS+ GS PS+ SS
Sbjct: 242 GSSSSIFGATGSSPSFSVASSASGSSPSIFGATGSSPFFGSSSSAGST-----PSLFASS 296
Query: 86 SDNGLKS 66
S S
Sbjct: 297 SSGATTS 303
>At5g38690.1 68418.m04678 expressed protein
Length = 572
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 TSTRCRMN*PVLMGRNSSYQIRSRTNCPRKVSTPVRIRT--NTPPQTAARYKWTCHRNRT 241
T +CR L+G S + CP K+ T + + A + W C + R
Sbjct: 31 TCHQCRQKRTDLVG--SCVTKKKDKTCPIKLCTKCILNRYGENAQEVALKKDWICPKCRG 88
Query: 242 GCNC 253
CNC
Sbjct: 89 NCNC 92
>At4g39630.1 68417.m05601 expressed protein
Length = 233
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +1
Query: 166 PGQDTYEHPPADGSKVQVDVSPKSDRL 246
PG D ++ P +G ++ ++PK+ RL
Sbjct: 175 PGHDAFQTPGVNGQRLSFGMTPKTLRL 201
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +3
Query: 255 GALRQVGRERPHRD----DDPDQGQGQVHHRPH 341
G+ + + HRD DD +QG G+ HH H
Sbjct: 54 GSYHEEEHDHQHRDFENYDDLEQGGGEFHHGDH 86
>At3g43610.1 68416.m04640 tubulin family protein
Length = 1120
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 335 SVVHLPLTLIRIVISVRSFPSHLSKGANSCSLSD 234
+VVH +TL+ + + R + + AN C L D
Sbjct: 213 NVVHPKITLLEVFLHTRELRTQIEALANICDLYD 246
>At3g22550.1 68416.m02849 senescence-associated protein-related
similar to senescence-associated protein SAG102
(GI:22331931) [Arabidopsis thaliana]
Length = 267
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -3
Query: 107 PSVPVSSSDNGLKSR--RPAIDRAVTSSGLVTKQCVA 3
P P+SSSD G+K+R +P + + SGL + + ++
Sbjct: 123 PDSPISSSDFGIKTRNSQPETKKPGSESGLGSPRIIS 159
>At3g05400.1 68416.m00590 sugar transporter, putative similar to
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701, integral membrane
protein GB:U43629 from [Beta vulgaris]; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 462
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 190 PPADGSKVQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILIKVKGKCTTDHISAAGPWL 363
P A K+ V+ S K+ + + + F+K + LT L+ ++ C T IS+ G L
Sbjct: 230 PEACEIKISVEASKKNSNINIRSLFEKRYAHQLTIGIGLMLLQQLCGTAGISSYGSTL 287
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 86 MN*PVLMGRNSSYQIRSRTNCPRKVSTPVR 175
MN V +G +S ++R++TN KV P++
Sbjct: 700 MNIIVYVGTRASREVRNKTNDVHKVGRPIK 729
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 126 RSVRGRTALERFRPRSGYVRT--PPRRRQQGTSGRVTEIGQAA 248
+SVRGR+ + R PR+RQ+ + R+TE QAA
Sbjct: 865 KSVRGRSQATKAVSRDSKPSDGETPRKRQREQTSRITESEQAA 907
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.135 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,312,709
Number of Sequences: 28952
Number of extensions: 235834
Number of successful extensions: 624
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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