Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P09
(414 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 28 3.1
U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer ... 28 3.1
AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform... 28 3.1
Z82272-9|CAB05224.1| 341|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z81146-8|CAB03527.1| 341|Caenorhabditis elegans Hypothetical pr... 27 4.1
U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegr... 27 5.4
AF045645-5|AAL06039.2| 140|Caenorhabditis elegans Ground-like (... 27 5.4
AF025471-3|AAB71061.1| 183|Caenorhabditis elegans Hypothetical ... 27 7.1
AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical ... 27 7.1
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 26 9.4
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 353 YISEFHPPNVSYSASEDKYGSRFLSANPLGFPVDRPLH 240
+ISE+HPP + Y + + F + P+ FP P+H
Sbjct: 229 FISEYHPPFIPYYIPNQSFSNAF-NQYPMPFPY--PIH 263
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 27.9 bits (59), Expect = 3.1
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -2
Query: 365 VLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFPVDRPLHLWXXXXXXXXXXNFHDVM 186
+L+V +SE P YSA + G+ L NPL LH+ + D++
Sbjct: 366 LLLVDLSENKLPKTPYSAFNSRVGTVLLKENPL--VCTENLHMLQQGTGVYVRDS-PDII 422
Query: 185 IHHKPTPE 162
KPTP+
Sbjct: 423 CGRKPTPK 430
>U39648-6|AAM15602.1| 557|Caenorhabditis elegans Abnormal dauer
formation protein9, isoform b protein.
Length = 557
Score = 27.9 bits (59), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 321 LQCKRRQVWFSIPICQSSWL 262
L C+R +W ++ I QSSW+
Sbjct: 11 LSCERASIWCNMNISQSSWI 30
>AF407572-1|AAL65132.1| 557|Caenorhabditis elegans DAF-9 isoform A
protein.
Length = 557
Score = 27.9 bits (59), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 321 LQCKRRQVWFSIPICQSSWL 262
L C+R +W ++ I QSSW+
Sbjct: 11 LSCERASIWCNMNISQSSWI 30
>Z82272-9|CAB05224.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.4 protein.
Length = 341
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 414 PAPSLITERSCWWYAVCIDGLY 349
PAP L E+SC WY G Y
Sbjct: 49 PAPQLEKEQSCSWYVTIPRGYY 70
>Z81146-8|CAB03527.1| 341|Caenorhabditis elegans Hypothetical
protein F55G11.4 protein.
Length = 341
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 414 PAPSLITERSCWWYAVCIDGLY 349
PAP L E+SC WY G Y
Sbjct: 49 PAPQLEKEQSCSWYVTIPRGYY 70
>U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegrin
plus metalloprotease)family protein 4 protein.
Length = 686
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 126 NNIRLKVVRNYDLWSRFVMDHDIVEVDILNVVVCNLPQV*WPINWE 263
N LK+V +Y +S F ++ + L ++ + ++ PINW+
Sbjct: 187 NRCTLKLVADYSFYSIFGKNNTGIVTKFLVNMIARVNEIYTPINWD 232
>AF045645-5|AAL06039.2| 140|Caenorhabditis elegans Ground-like (grd
related) protein26 protein.
Length = 140
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 202 LIF*MLLFVICHRCSGLSTG 261
LIF +L F +CH C+GL G
Sbjct: 10 LIFAILFFDLCHGCAGLFGG 29
>AF025471-3|AAB71061.1| 183|Caenorhabditis elegans Hypothetical
protein R52.5 protein.
Length = 183
Score = 26.6 bits (56), Expect = 7.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 312 CTVGNVRWMEFRNIDHQ 362
C+ G V WM FRN+D +
Sbjct: 87 CSDGKVAWMIFRNVDFE 103
>AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical
protein C49G7.7 protein.
Length = 893
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 414 PAPSLITERSCWWYAVCIDGLY 349
PAP L TE+SC W G Y
Sbjct: 361 PAPQLETEQSCSWIVTIPRGYY 382
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 162 DRSSLQLLNEYYFNGFLYVYIYVYLNI 82
+RSS+ L N++ F+ LY I+++LNI
Sbjct: 126 NRSSMILENKFRFSINLYRVIWIFLNI 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,482,858
Number of Sequences: 27780
Number of extensions: 202540
Number of successful extensions: 460
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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