Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P09
(414 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 30 0.54
At5g45340.2 68418.m05566 cytochrome P450 family protein similar ... 29 0.94
At5g45340.1 68418.m05565 cytochrome P450 family protein similar ... 29 0.94
At4g01970.1 68417.m00262 galactinol-raffinose galactosyltransfer... 29 1.6
At4g19230.2 68417.m02837 cytochrome P450 family protein cytochro... 28 2.2
At4g19230.1 68417.m02836 cytochrome P450 family protein cytochro... 28 2.2
At5g40390.1 68418.m04899 raffinose synthase family protein simil... 28 2.9
At5g47020.1 68418.m05795 glycine-rich protein strong similarity ... 27 5.0
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 27 6.6
At4g36195.1 68417.m05150 serine carboxypeptidase S28 family prot... 26 8.7
At4g36190.1 68417.m05149 serine carboxypeptidase S28 family prot... 26 8.7
At2g43090.1 68415.m05348 aconitase C-terminal domain-containing ... 26 8.7
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 30.3 bits (65), Expect = 0.54
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 126 NNIRLKVVRNYDLWSRFV-MDHDIVEVDILNVVVC 227
N+I+LKV+ N WS+ H I ++ NV++C
Sbjct: 304 NDIKLKVLANQQKWSQCAKCQHMIARIEGCNVIIC 338
>At5g45340.2 68418.m05566 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 446
Score = 29.5 bits (63), Expect = 0.94
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 398 LPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 258
LP G +G PYV + PNV ++A + +YGS F + LG P
Sbjct: 36 LPPGTMG-YPYVGETFQLYSQDPNVFFAAKQRRYGSVF-KTHVLGCP 80
>At5g45340.1 68418.m05565 cytochrome P450 family protein similar to
SP|Q42569|C901_ARATH Cytochrome P450 90A1 (SP:Q42569)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 463
Score = 29.5 bits (63), Expect = 0.94
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -2
Query: 398 LPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 258
LP G +G PYV + PNV ++A + +YGS F + LG P
Sbjct: 36 LPPGTMG-YPYVGETFQLYSQDPNVFFAAKQRRYGSVF-KTHVLGCP 80
>At4g01970.1 68417.m00262 galactinol-raffinose
galactosyltransferase, putative similar to
galactinol-raffinose galactosyltransferase GI:6634701
from [Vigna angularis]
Length = 807
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 266 QEDWQIGIENHTCLRLHCRKRSVDGIQKYRPSIHTAYHQHDLSVIK 403
Q DW + +H C H R++ G Y S H H+ +IK
Sbjct: 529 QPDWDMFQSDHVCAEYHAASRAICGGPVYL-SDHLGKASHNFDLIK 573
>At4g19230.2 68417.m02837 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 484
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2
Query: 398 LPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 258
LP G +G PYV + PNV + + + +YGS F + LG P
Sbjct: 36 LPPGTMG-WPYVGETFQLYSQDPNVFFQSKQKRYGSVF-KTHVLGCP 80
>At4g19230.1 68417.m02836 cytochrome P450 family protein cytochrome
P450, Arabidopsis thaliana; supported by cDNA:
gi_15293092_gb_AY050980.1_
Length = 467
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -2
Query: 398 LPKGRVGGMPYVLMVYISEFHPPNVSYSASEDKYGSRFLSANPLGFP 258
LP G +G PYV + PNV + + + +YGS F + LG P
Sbjct: 36 LPPGTMG-WPYVGETFQLYSQDPNVFFQSKQKRYGSVF-KTHVLGCP 80
>At5g40390.1 68418.m04899 raffinose synthase family protein similar
to galactinol-raffinose galactosyltransferase [Vigna
angularis] GI:6634701, seed imbibition protein
GB:AAA32975 GI:167100 from [Hordeum vulgare]; contains
Pfam profile PF05691: Raffinose synthase or seed
imbibition protein Sip1
Length = 783
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 266 QEDWQIGIENHTCLRLHCRKRSVDGIQKYRPSIHTAYHQHDLSVIK 403
Q DW + H C H R++ G Y I +HD ++K
Sbjct: 514 QPDWDMFQSTHPCAEFHAASRAISGGPIY---ISDCVGKHDFDLLK 556
>At5g47020.1 68418.m05795 glycine-rich protein strong similarity to
unknown protein (emb|CAB87688.1)
Length = 1417
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 240 PVADYKQQHSKYQLPRCHDP 181
PV YK KY+LP C+ P
Sbjct: 829 PVCPYKCVSEKYRLPNCYTP 848
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 331 GGWNSEI*TINTYGIPPT 384
GGW+ +I T YG+P T
Sbjct: 636 GGWDGQIRTFQNYGLPVT 653
>At4g36195.1 68417.m05150 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 488
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/37 (21%), Positives = 18/37 (48%)
Frame = -1
Query: 381 WWYAVCIDGLYF*IPSTERFLQCKRRQVWFSIPICQS 271
WW+ VC + YF + ++ + + + +C+S
Sbjct: 338 WWFQVCTEVAYFQVAPANDSIRSHQINTEYHLDLCKS 374
>At4g36190.1 68417.m05149 serine carboxypeptidase S28 family protein
contains Pfam PF05577: Serine carboxypeptidase S28
Length = 493
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/37 (21%), Positives = 18/37 (48%)
Frame = -1
Query: 381 WWYAVCIDGLYF*IPSTERFLQCKRRQVWFSIPICQS 271
WW+ VC + YF + ++ + + + +C+S
Sbjct: 338 WWFQVCTEVAYFQVAPANDSIRSHQINTEYHLDLCKS 374
>At2g43090.1 68415.m05348 aconitase C-terminal domain-containing
protein contains Pfam profile PF00694: Aconitase
C-terminal domain
Length = 251
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 312 CTVGNVRWMEFRNIDHQYIRHTTNTTFR 395
CT G+V +E R D I HTT ++
Sbjct: 193 CTTGDVATVELREGDSILINHTTGKEYK 220
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,832,619
Number of Sequences: 28952
Number of extensions: 185911
Number of successful extensions: 440
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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