Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P08
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 132 1e-31
11_01_0189 - 1493618-1493637,1493728-1493795,1494070-1494207,149... 36 0.016
09_02_0022 + 3065644-3065953,3066048-3067162,3067261-3067437,306... 36 0.016
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38... 35 0.038
03_02_0036 + 5182345-5183511 32 0.20
10_06_0085 + 10511258-10512327,10512978-10513058,10513318-105133... 32 0.26
10_01_0329 - 3599571-3600554 29 2.5
10_01_0322 + 3516922-3517899 29 2.5
06_03_0357 - 19830555-19831178 29 2.5
04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727 29 2.5
02_04_0544 - 23768808-23768910,23769005-23769030,23769379-237694... 29 2.5
10_01_0320 + 3506183-3507109 28 3.3
11_06_0263 + 21777178-21777342,21777742-21777823,21777939-217780... 28 4.3
10_01_0025 - 328105-328188,328281-328337,328680-328734,328809-32... 28 4.3
02_05_1079 + 33950290-33950337,33950418-33952586,33952690-339527... 28 4.3
02_05_1024 + 33582921-33583309,33583381-33583444 28 4.3
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 28 4.3
10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097 27 5.7
08_02_1461 - 27299891-27301870 27 5.7
04_04_0451 - 25323178-25323241,25323614-25323741,25324533-253246... 27 7.5
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 27 10.0
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 27 10.0
02_05_0559 - 29953309-29953722,29953852-29953938,29954280-299543... 27 10.0
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 27 10.0
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 132 bits (319), Expect = 1e-31
Identities = 66/160 (41%), Positives = 98/160 (61%), Gaps = 6/160 (3%)
Frame = +2
Query: 5 FEIFHMREKEIPVDSVEI---KEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQAP 175
FE+F ++E++IP++ +E+ + I AFAWEP G +FA+IHGD ISFY + T
Sbjct: 444 FELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNI 503
Query: 176 TLRKKF---ERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGI 346
+ K + K N LFWSP G+FIV A L G LEF + ++ M +H+ + I
Sbjct: 504 SRVSKLTTLKGKQANALFWSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHFMATDI 563
Query: 347 EWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKIIRRVMKE 466
WDPTGRY+ + V+S+ +M+ G+ IWSF GK + +V K+
Sbjct: 564 MWDPTGRYLASAVTSVH-EMENGFQIWSFSGKQLYKVSKD 602
>11_01_0189 -
1493618-1493637,1493728-1493795,1494070-1494207,
1494647-1494698,1494803-1494902,1495606-1495681,
1495757-1495844,1496248-1496342,1496506-1496605,
1496765-1496879,1497077-1497241,1497362-1497547
Length = 400
Score = 35.9 bits (79), Expect = 0.016
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 221 WSPSGQFIVLANLGLTGGALEFLDTNDFTIMN-VCDHYQMSGIEWDPTGRYVVTGVSS 391
WSPSG +++ A L G +TN +T + +SG WDP GR V+ S+
Sbjct: 238 WSPSGDYLLTAKLD---GTFHLWETNTWTSEPWSSSNGYVSGANWDPEGRIVLLSFSN 292
>09_02_0022 +
3065644-3065953,3066048-3067162,3067261-3067437,
3067535-3067648,3068614-3068718,3068930-3069064,
3069148-3069203,3069277-3069382,3069515-3069631,
3069705-3069831,3069915-3070141,3070164-3070727
Length = 1050
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 209 NHLFWSPSGQFIVLANLGLTGGALEF-LDTNDFTIMNVCDHYQ-MSGIEWDPTGRYVVT 379
N L WSP GQF LA GL + + DT + +H Q + + W P GRY+VT
Sbjct: 210 NALCWSPDGQF--LAVPGLRNNVVMYDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVT 266
Score = 33.9 bits (74), Expect = 0.066
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 74 AFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLA 253
A W P G +F + G N+ + Y +TG+ K +P L WSP+G+++V A
Sbjct: 211 ALCWSPDG-QFLAVPGLRNNVVM--YDRDTGEEVFTLKGEHEQPVCSLCWSPNGRYLVTA 267
Query: 254 NL 259
L
Sbjct: 268 GL 269
>08_01_0058 +
388989-389102,389226-389337,389457-389483,389787-389859,
389958-390061,390144-390358,390429-390528,390739-390805,
391628-391716,391810-391948,392057-392157,392921-393088,
393302-393510
Length = 505
Score = 34.7 bits (76), Expect = 0.038
Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = +2
Query: 68 IQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKK--FERKPFNHLFWSPSGQF 241
+ + P G A I + + G+A ++K F K L WS G F
Sbjct: 67 VNVLRFSPSGENLASGADGGGIIIWKLHSTDDGEAWKVQKTLLFHHKDVLDLQWSQDGAF 126
Query: 242 IVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVTGVSSLKCKM 406
+V A++ + + + + + HY + G+ WDP G+Y+ + S C++
Sbjct: 127 LVSASVDNSCIVWDAIKGSVQQKLEGHLHY-VQGVAWDPLGQYIASLSSDRTCRI 180
>03_02_0036 + 5182345-5183511
Length = 388
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -1
Query: 312 IIVKSLVSKNSKAPPVRPKLASTMNCPEGDQNRWLNGFLSNF 187
+++ S+V+ APPV LA+ + P G +W++ L +
Sbjct: 243 VLICSVVAAAIAAPPVAAALAAAASIPVGSMGKWIDSLLKGY 284
>10_06_0085 +
10511258-10512327,10512978-10513058,10513318-10513396,
10514160-10514201
Length = 423
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 312 IIVKSLVSKNSKAPPVRPKLASTMNCPEGDQNRWLNGFLSNF 187
++V S+V+ APPV LA+ + P G +W++ L +
Sbjct: 233 LLVCSVVAAAIAAPPVAAALAAAASMPVGSAGKWMDSLLKKY 274
>10_01_0329 - 3599571-3600554
Length = 327
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -3
Query: 241 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 80
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 138 ELPRARPEKQVRFMMRQLIGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 191
>10_01_0322 + 3516922-3517899
Length = 325
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -3
Query: 241 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 80
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 136 ELPRARPEKQVRFMMRQLIGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 189
>06_03_0357 - 19830555-19831178
Length = 207
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 301 FHYYERLRPLPDVGHRMGSDWTLCGDWSVLSQVQDG 408
F Y+ R P +GH MG W + GD L+ G
Sbjct: 141 FEYWARAELPPAMGHDMGGGWCVDGDGDGLAAAVAG 176
>04_04_0518 - 25858336-25859537,25859919-25860749,25861640-25861727
Length = 706
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 50 VEIKEPIQAFAWEPVGSKFAIIHGDPANISISF 148
+E++ P+ + + P G+ F +IHG + ISF
Sbjct: 438 LEVEVPMLVYEFVPNGTLFELIHGKNQGLQISF 470
>02_04_0544 -
23768808-23768910,23769005-23769030,23769379-23769497,
23769542-23769668,23769842-23769905,23769981-23770095,
23770867-23771101,23771196-23771382,23771948-23772305,
23772432-23772465
Length = 455
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 347 EWDPTGRYVVTGVSSLKCKMDCGYYIWSFQGKIIRRVMKE 466
EW P GR+ +T ++ + ++D G I+ G + + M E
Sbjct: 288 EWSPDGRHFMTATTAPRLQIDNGIKIFDHNGSLQFKKMFE 327
>10_01_0320 + 3506183-3507109
Length = 308
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = -3
Query: 241 ELPRG*PEQMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPS 80
ELPR PE+ V + +L+ ++++ H++ D + + +L+ F S
Sbjct: 119 ELPRARPEKQVRFMMRQLVGAAKKMHASHVIHRDIKPENILNSFGDLKVCDFGS 172
>11_06_0263 +
21777178-21777342,21777742-21777823,21777939-21778028,
21778447-21778604,21778852-21778873,21779048-21779175,
21779486-21779685,21780600-21780663,21781594-21781704,
21781804-21781941,21782306-21782448,21782521-21782575,
21782921-21782977,21783093-21783176
Length = 498
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 131 NISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTI 310
+ ++ ++ + P R +K NH+++SP GQ++ A+ + + T F
Sbjct: 363 DFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGI-TGKFVA 421
Query: 311 M---NVCDHYQMSGIEWDPTGRYVVTG 382
+V D YQ+S W R +++G
Sbjct: 422 AFRGHVADVYQIS---WSADSRLLLSG 445
>10_01_0025 -
328105-328188,328281-328337,328680-328734,328809-328951,
330772-330909,331010-331120,332621-332684,334179-334378,
334678-334805,335468-335593,335828-335917,336035-336116,
336845-336910
Length = 447
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 131 NISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTI 310
+ ++ ++ + P R +K NH+++SP GQ++ A+ + + T F
Sbjct: 312 DFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDKSVKLWNGI-TGKFVA 370
Query: 311 M---NVCDHYQMSGIEWDPTGRYVVTG 382
+V D YQ+S W R +++G
Sbjct: 371 AFRGHVADVYQIS---WSADSRLLLSG 394
>02_05_1079 +
33950290-33950337,33950418-33952586,33952690-33952780,
33952955-33953435,33954249-33954345
Length = 961
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -3
Query: 325 VADVHNSEIVSVQKLQSSTGETQVGEHYELPRG*PEQMVERLPLELLAQSRRLPGVH-LV 149
+ +VH V+K + T GE + + +G PEQ++E + A+ + VH L+
Sbjct: 394 IKEVHFLPFNPVEKRTAITYIDGNGEWHRISKGAPEQIIELCKMSKDAEKK----VHTLI 449
Query: 148 E--ADRDVRRVTVDYSEL 101
+ ADR +R + V Y ++
Sbjct: 450 DQYADRGLRSLGVSYQKV 467
>02_05_1024 + 33582921-33583309,33583381-33583444
Length = 150
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = -3
Query: 439 PLEGPDVIA---AVHLALERGHSSHHIA 365
P GP V A AV L+ +RGHSS H++
Sbjct: 86 PRAGPTVCAGLTAVELSRQRGHSSSHVS 113
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 125 PANISISFYQVNTGQAPT 178
PA +S+SFY VN G+ P+
Sbjct: 592 PAAVSMSFYDVNAGEQPS 609
>10_07_0052 - 12382975-12383141,12384032-12384458,12385047-12385097
Length = 214
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 90 GSQAKACMGSLISTESTGISFSLIWKISK 4
G +AK+C G +++ +STG S I + K
Sbjct: 143 GREAKSCAGGILADKSTGCSIRKITRSDK 171
>08_02_1461 - 27299891-27301870
Length = 659
Score = 27.5 bits (58), Expect = 5.7
Identities = 32/105 (30%), Positives = 38/105 (36%), Gaps = 16/105 (15%)
Frame = +2
Query: 182 RKKFERKP---FNHLFWS------PSGQFIV-LANLGLTGGALE---FLDTNDFTIMNVC 322
R KFER P FN W P Q + N+ LT G L F D D V
Sbjct: 533 RVKFERGPSLAFNVFDWKGEKVAPPLVQKLADRHNISLTCGFLRHICFSDKYDADRAAVL 592
Query: 323 DHYQMSGIEWDPTGR---YVVTGVSSLKCKMDCGYYIWSFQGKII 448
+H G D G YVV D Y +W+F K +
Sbjct: 593 EHIDGGGKRKDAAGEMGIYVVNASLGFLTNFDDAYRLWAFVAKFL 637
>04_04_0451 -
25323178-25323241,25323614-25323741,25324533-25324634,
25325314-25325382,25325489-25325557,25325646-25325720,
25325805-25325909,25326394-25326492,25326626-25328344,
25328629-25328931,25329031-25329129,25329733-25329850,
25329933-25330018,25330091-25330159,25330232-25330306,
25330675-25330772,25331271-25331432,25332391-25332556,
25332902-25332970,25333064-25333126,25333221-25333376,
25334027-25334365
Length = 1410
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +1
Query: 133 HLDQLLPSEHRAGADSAQEVREEAVQPSVLVTLGAVHS----ARQLGSHRWS 276
HL+ L+P+ D Q VRE A Q +L+TL V S + GS+ W+
Sbjct: 81 HLNALVPAAVERLGDGKQPVREAARQ--LLITLMEVSSPTIIVERAGSYAWT 130
>12_02_1042 + 25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 134 ISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQF 241
+ I +++N G P L R +NH + S SG F
Sbjct: 1011 LRILSFKLNVGHFPHLADLVTRINYNHYYMSDSGSF 1046
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 307 YYERLRPLPDVGHRMGSDWTLCGDWS 384
Y+ R+ P D GH +DW G S
Sbjct: 217 YFRRIPPFTDYGHISQADWDTTGQVS 242
>02_05_0559 -
29953309-29953722,29953852-29953938,29954280-29954385,
29954468-29954559,29955187-29955438
Length = 316
Score = 26.6 bits (56), Expect = 10.0
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +2
Query: 179 LRKKFERK-PFNHLFWSPSGQFIVLANLGLTGGALEFLDTNDF-TIMNVCDHYQMS-GIE 349
L K F+ + P NH SP + V+ G +D N T+ ++ H+ S
Sbjct: 139 LYKHFQFEWPVNHTALSPDRKLAVIVGDDPNG---LLIDANSGKTLHSLKGHFDYSFASA 195
Query: 350 WDPTGRYVVTGVSSLKCKM 406
W P GR TG C++
Sbjct: 196 WSPDGRTFATGNQDKTCRI 214
>02_04_0038 - 19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 134 ISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQF 241
+ I +++N G P L R +NH + S SG F
Sbjct: 962 LRILSFKLNVGHFPHLADLVTRINYNHYYMSDSGSF 997
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,267,985
Number of Sequences: 37544
Number of extensions: 319286
Number of successful extensions: 1038
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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