Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P08
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical...    82   2e-16
Z66496-3|CAA91279.2|  570|Caenorhabditis elegans Hypothetical pr...    54   4e-08
U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical pr...    33   0.077
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr...    33   0.077
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81113-5|CAB03282.3|  404|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF164430-1|AAF82632.1|  404|Caenorhabditis elegans LIS-1 protein.      28   2.9  
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical...    28   3.8  
AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical...    28   3.8  
Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z73896-4|CAA98057.2|  503|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U23171-5|AAC46705.2|  158|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL032646-10|CAA21681.1|  725|Caenorhabditis elegans Hypothetical
           protein Y54E2A.11a protein.
          Length = 725

 Score = 81.8 bits (193), Expect = 2e-16
 Identities = 49/155 (31%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
 Frame = +2

Query: 8   EIFHMREKEIPVDSVEIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVN-TGQAPTLR 184
           +IF + +K++ + ++ + EP   F W+P G KF ++ G+ A  +   Y++     AP L 
Sbjct: 447 DIFEIDKKDVSLMNLPLSEPFIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANSHAPKLV 506

Query: 185 KKFER-KPFNHLFWSPSGQFIVLANLGLTGGALEFLDT--NDFTIMNVCDHYQMSGIEWD 355
            K +    FN + ++P G ++ +      GG + F+DT  ++    NV +H   +   WD
Sbjct: 507 SKLDAGVHFNEVQFAPKGGWLAVLAKVSAGGNVYFIDTSLSEAKRTNVIEHPLFNKGYWD 566

Query: 356 PTGRYVVTGVSSL--KCKMDCGYYIWSFQGKIIRR 454
           PTGRY VT  S+L  +   D GY I++FQG+ + R
Sbjct: 567 PTGRYFVT-CSTLGGRAGADLGYRIFTFQGRELCR 600


>Z66496-3|CAA91279.2|  570|Caenorhabditis elegans Hypothetical
           protein E04D5.1a protein.
          Length = 570

 Score = 54.4 bits (125), Expect = 4e-08
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +2

Query: 11  IFHMREKEIPVDSVEIKEPIQAFAWEPVGSKFAIIHGD-PANISISFYQVNTGQAPTLRK 187
           + +++  E  V  +E K PI A  W P G +FA+ +G  PA ++  FY  N    P    
Sbjct: 260 LINIQSGESVVVPLEKKGPIYAAKWNPNGREFAVCYGYMPAKVT--FY--NPRGVPIFDT 315

Query: 188 KFERKPFNHLFWSPSGQFIVLANLG-LTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTG 364
                P N +F++  G  +++   G +  G +EF D      +   +    +  +W P G
Sbjct: 316 I--EGPRNDVFYNAFGNIVLICGFGNIAKGKMEFWDVETKKEIISIEVPNTTLFDWAPDG 373

Query: 365 RYVVTGVSSLKCKMDCGYYIWSFQGKII 448
           ++ VT  ++ + ++D  Y  W + G+++
Sbjct: 374 QHFVTCTTAPRLRIDNSYRFWHYTGRML 401


>U21322-6|AAN65314.2|  669|Caenorhabditis elegans Hypothetical
           protein K10D2.1b protein.
          Length = 669

 Score = 33.5 bits (73), Expect = 0.077
 Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +2

Query: 53  EIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQ-----APTLRKKFERKPFNHL 217
           +I+ P++  +W+P+G   A + GD     + F+  ++ Q             E      L
Sbjct: 174 DIQLPVKGLSWDPIGKYLASLEGDK---KLRFWATDSWQCVKSVTEPFESNIEETMLTRL 230

Query: 218 FWSPSGQFIV 247
            WSP G++++
Sbjct: 231 DWSPDGKYLM 240



 Score = 27.5 bits (58), Expect = 5.1
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 221 WSPSGQFIVLANLGLTGGALEFLDTND-FTIMNVCDHYQMSGIEWDPTGRYVVT 379
           WSP+G+++   ++             D  T++N      + G+ WDP G+Y+ +
Sbjct: 141 WSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQ-LPVKGLSWDPIGKYLAS 193


>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
           protein K10D2.1a protein.
          Length = 1223

 Score = 33.5 bits (73), Expect = 0.077
 Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +2

Query: 53  EIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQ-----APTLRKKFERKPFNHL 217
           +I+ P++  +W+P+G   A + GD     + F+  ++ Q             E      L
Sbjct: 462 DIQLPVKGLSWDPIGKYLASLEGDK---KLRFWATDSWQCVKSVTEPFESNIEETMLTRL 518

Query: 218 FWSPSGQFIV 247
            WSP G++++
Sbjct: 519 DWSPDGKYLM 528



 Score = 27.5 bits (58), Expect = 5.1
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 221 WSPSGQFIVLANLGLTGGALEFLDTND-FTIMNVCDHYQMSGIEWDPTGRYVVT 379
           WSP+G+++   ++             D  T++N      + G+ WDP G+Y+ +
Sbjct: 429 WSPNGKYLASGSIDYRIIIYNARKLPDRITVLNDIQ-LPVKGLSWDPIGKYLAS 481


>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
           protein C23H4.6 protein.
          Length = 1137

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 8   EIFHMREKEIPVDSVEIKEPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRK 187
           EI  +R KEI     +++E +  F  E +  K A       +++I   ++   Q   LRK
Sbjct: 374 EIMLIR-KEIAKAQKQLREALGKFGHEELTKKLAEAEDKRESLNIEIEEIEHVQLKALRK 432

Query: 188 KFER 199
           K+E+
Sbjct: 433 KYEK 436


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
            T01D3.7 protein.
          Length = 2882

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 443  FSPGRTRCNSRSPSCT*ERTLQSPHSVQSDPIRCPTSGN 327
            F  G    N+ S  CT  RT  + H V S  IRCP   N
Sbjct: 989  FGEGFPITNNNSYICTFGRTSVTGHRVSSALIRCPIPSN 1027


>Z81113-5|CAB03282.3|  404|Caenorhabditis elegans Hypothetical
           protein T03F6.5 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 22/107 (20%), Positives = 43/107 (40%)
 Frame = +2

Query: 86  EPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGL 265
           +P G+   I+     + SI  + +NTG         E      L + P G++++      
Sbjct: 296 QPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDK 354

Query: 266 TGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVTGVSSLKCKM 406
           T    E         +   +H+ +S + +  T  +V+TG   + CK+
Sbjct: 355 TLRVWELSAQRCMKAIEAHEHF-VSTVAFHQTSPFVITGSVDMSCKV 400


>AF164430-1|AAF82632.1|  404|Caenorhabditis elegans LIS-1 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 22/107 (20%), Positives = 43/107 (40%)
 Frame = +2

Query: 86  EPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQFIVLANLGL 265
           +P G+   I+     + SI  + +NTG         E      L + P G++++      
Sbjct: 296 QPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENW-VRGLAFHPKGKYLISVADDK 354

Query: 266 TGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVTGVSSLKCKM 406
           T    E         +   +H+ +S + +  T  +V+TG   + CK+
Sbjct: 355 TLRVWELSAQRCMKAIEAHEHF-VSTVAFHQTSPFVITGSVDMSCKV 400


>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical protein
            T01E8.5 protein.
          Length = 1270

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 367  ASSRIPFDARHLVMVADVHNSEIVSVQKLQSST 269
            AS   P D+++  M+ ++H+S  + V KLQ  T
Sbjct: 1082 ASQAFPCDSKYAKMLGELHSSGRLQVMKLQGFT 1114


>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical protein
            T01E8.5 protein.
          Length = 1270

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 367  ASSRIPFDARHLVMVADVHNSEIVSVQKLQSST 269
            AS   P D+++  M+ ++H+S  + V KLQ  T
Sbjct: 1082 ASQAFPCDSKYAKMLGELHSSGRLQVMKLQGFT 1114


>AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1b protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +2

Query: 209 NHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVT 379
           N L W PSG  +   +   T    + L      + +  +    +G+ WDP+G+Y+ T
Sbjct: 138 NALCWDPSGTQLASVSNDHTLAVHDALTGKRLFVAS--NFRSPNGVCWDPSGKYIAT 192


>AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1a protein.
          Length = 489

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +2

Query: 209 NHLFWSPSGQFIVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVT 379
           N L W PSG  +   +   T    + L      + +  +    +G+ WDP+G+Y+ T
Sbjct: 140 NALCWDPSGTQLASVSNDHTLAVHDALTGKRLFVAS--NFRSPNGVCWDPSGKYIAT 194


>Z83119-2|CAB05579.2|  608|Caenorhabditis elegans Hypothetical
           protein R05H10.2 protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -3

Query: 217 QMVERLPLELLAQSRRLPGVHLVEADRDVRRVTVDYSELRPDRFPSESLYGFL 59
           Q +  + L+ LAQ    PG  + E      RV +D   L PD  P  S +GF+
Sbjct: 420 QKINDVKLKELAQKFTSPGALITEC-----RVWMDKKRLTPDGKPKSSGFGFV 467


>Z73896-4|CAA98057.2|  503|Caenorhabditis elegans Hypothetical
           protein F09E8.6 protein.
          Length = 503

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 379 SHHIASSRIPFD--ARHLVMVADVHNSEIVSVQK 284
           + H AS +  FD  A H ++  D HN+E   V+K
Sbjct: 28  NEHAASIKAKFDDYAEHYLLPEDFHNAETAPVKK 61


>Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical
           protein C14B1.4 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 1/130 (0%)
 Frame = +2

Query: 62  EPIQAFAWEPVGSKFAIIHGDPANISISFYQVNTGQAPTLRKKFERKPFNHLFWSPSGQF 241
           +P+ A ++   GS  A    D     +  +    GQ        E  P   + +SP+G++
Sbjct: 214 DPVSAVSFNRDGSLIASGSYDGL---VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270

Query: 242 IVLANLGLTGGALEFLDTNDFTIMNVCDHYQMSGIEWDPTGRYVVTGVS-SLKCKMDCGY 418
           I+ +NL  T    +F  +   T+     H      ++     + VTG    +    DC  
Sbjct: 271 ILASNLDSTLKLWDF--SKGKTLKQYTGH---ENSKYCIFANFSVTGGKWIISGSEDCKI 325

Query: 419 YIWSFQGKII 448
           YIW+ Q + I
Sbjct: 326 YIWNLQTREI 335


>U23171-5|AAC46705.2|  158|Caenorhabditis elegans Hypothetical
           protein K02A2.1 protein.
          Length = 158

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = -3

Query: 211 VERLPLELLAQSRRLPGVHLVEADRDVRRVTVD--YSELR 98
           +E +PLELL  +     VH  +AD+ V +VTVD  + E+R
Sbjct: 67  IEGIPLELLDDNSIQ--VHHGDADKHVSKVTVDAFHEEMR 104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,674,635
Number of Sequences: 27780
Number of extensions: 253940
Number of successful extensions: 774
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)