Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P07
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   3.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   4.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   5.9  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 229 PSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSY 333
           P P +  ++S  Y PLS P     A    A  S++
Sbjct: 21  PYPSIGVESSAFYSPLSNPYALKDAGGTAADMSAW 55


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 RDRNSLHSPRTLM 340
           RDR SLH P+  M
Sbjct: 93  RDRRSLHGPQQQM 105


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 215 LCNHSQ-VRN*PQILRTNTNHYLYLNTFLWRDRNSLHS 325
           +C+++  +RN    L T+  H  +LN  + ++  +LH+
Sbjct: 180 ICSYTVLIRNKISNLNTSLIHSTHLNGDIVKEHQNLHN 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.312    0.126    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,214
Number of Sequences: 336
Number of extensions: 1630
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)