Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P07
(395 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.35
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 27 0.80
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 27 1.1
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 26 2.4
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 2.4
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 26 2.4
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 26 2.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 3.2
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 3.2
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 4.3
SPBC3B8.05 |||diphthamide biosynthesis protein |Schizosaccharomy... 25 4.3
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 4.3
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 25 5.6
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 25 5.6
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 25 5.6
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 25 5.6
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 24 7.4
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 24 7.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 24 7.4
SPAC1782.05 |||phosphotyrosyl phosphatase activator homolog|Schi... 24 7.4
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 24 9.8
SPAC821.05 |||translation initiation factor eIF3h|Schizosaccharo... 24 9.8
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 24 9.8
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.35
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 58 YEFVTPLTSLVVVKPNE--TNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLP 231
Y + + + +V+ N+ T+ + E ++PA +++ S+P Y IS+ R T+ L SLP
Sbjct: 483 YGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDAN--SMPPYIISSSRDCTIRLWSLP 540
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 27.5 bits (58), Expect = 0.80
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 58 YEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISN 195
Y F+T L+ ++++ +E + + +++P S VPVY IS+
Sbjct: 558 YRFLTQLSKSLLMEISEEDEIYLYELERPYEDGSDDILVPVYHISD 603
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 1.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 178 QGPMQTKILEKPVYQQIPRSLHSFHLVSLLPKTSE 74
+GP+ + I + PV +H+F L L+P SE
Sbjct: 177 EGPVSSSIQDVPVMSTEQPRMHTFSLSELVPLLSE 211
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 2.4
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 52 LKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDI----SNVRPGTVAL 219
L Y+F+ +T VV P + ++ SSF V +Y I +V G VA+
Sbjct: 134 LVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVAIYCIFATSKDVSIGPVAV 193
Query: 220 QSLPSPQLTAD 252
SL + ++ A+
Sbjct: 194 MSLVTSKVIAN 204
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 2.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 242 NCGLGSDCRATVPGLTLEISYTGTD 168
NC + + G+TLE++Y TD
Sbjct: 412 NCSSEEEAQQVASGVTLEVAYESTD 436
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +1
Query: 223 SLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSYADVSD 348
SLP+P Y QP+S+PQ + P A SS + +SD
Sbjct: 168 SLPTPY---PVQYSTQPVSLPQPIAAPAPPSAE-SSKSTISD 205
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 181 YDISNVRPGTVALQSLPSPQL 243
Y NVR ++ LQSLP+P L
Sbjct: 443 YSTDNVRTDSLDLQSLPTPTL 463
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 3.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 127 ESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPS 234
E +D P +E S S+P+ D+SN G + + PS
Sbjct: 941 EDIDVP-LREGSLTSIPIDDVSN--SGDITMGEEPS 973
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 25.4 bits (53), Expect = 3.2
Identities = 17/82 (20%), Positives = 36/82 (43%)
Frame = +1
Query: 88 VVVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQY 267
VV+K + + ++ E ++ + + + Y S + T A+ ++ S D ++Y
Sbjct: 53 VVLKNEKNDELSGE--ERCERLQKTLKEILPYSDSKICLATDAMNNIKSCIDRLDAGFEY 110
Query: 268 QPLSIPQHFSMARPQLASFSSY 333
L IPQ + P + +Y
Sbjct: 111 VELEIPQQLRLGYPDDRALMNY 132
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 4.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 213 YGSWSNVGNIIYRDRCKRRFLKSRFINRFRVHCIRFI 103
Y + V NI + +LK+ I+ F + CIRFI
Sbjct: 682 YSGIATVFNITFPPILYGSYLKTSTISPFHLACIRFI 718
>SPBC3B8.05 |||diphthamide biosynthesis protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 436
Score = 25.0 bits (52), Expect = 4.3
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 373 HHNFQIQPCLRHQRTRRMKRVAV 305
++NF+I + H R R+ KRVA+
Sbjct: 72 NYNFEIHKTIWHIRLRKAKRVAL 94
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 4.3
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 118 VNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTS 258
V+ +D P+ E+ F+ + V + +V + + PSP L++ S
Sbjct: 297 VDTPGIDAPSDLEAKFSDLGVSSVVSVTSPLQSCTNSPSPPLSSPAS 343
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 24.6 bits (51), Expect = 5.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 226 LPSPQLTADTSYQYQPLSIPQHFSMARPQLASFS 327
L P L+A TS QP S+P ++PQ S S
Sbjct: 313 LELPTLSAVTSDSAQPHSLPASMPSSQPQSRSES 346
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 24.6 bits (51), Expect = 5.6
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 49 ALKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASV 174
A E TP +L V P + NA N+ + + FAS+
Sbjct: 519 ATPLELATPFANLNVSSPLDRNATNSSNTLNGSAMNDYFASL 560
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 5.6
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 221 NHSQVRN*PQILRTNTNHYLYL 286
NH QV N P++LRT+ + ++L
Sbjct: 512 NHLQVCNLPELLRTSNSFGIWL 533
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 24.6 bits (51), Expect = 5.6
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 268 QPLSIPQHFS-MARPQLASFSSYADV 342
+P+ IPQHFS +ARP L S + D+
Sbjct: 339 RPIEIPQHFSPIARP-LTSQEAIVDM 363
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 24.2 bits (50), Expect = 7.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 146 LFKNLRLHRSLYMIFPTLDQEP*LCNHSQVR 238
L K L+ HR Y+IF Q NH+ ++
Sbjct: 88 LLKELKKHRDSYVIFDCPGQVELFTNHNSLQ 118
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 24.2 bits (50), Expect = 7.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 156 FLKSRFINRFRVHCIRFIWFHY 91
+ KSR + F HCI F+W Y
Sbjct: 391 YAKSRNLKAFG-HCILFVWIVY 411
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 24.2 bits (50), Expect = 7.4
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -2
Query: 235 DLGVIAELRFLV*RWKYHIQGPMQTKILEK 146
+ G + L+ + + ++H+Q ++TKIL+K
Sbjct: 720 ETGKLVALKIIRNKKRFHMQALVETKILQK 749
>SPAC1782.05 |||phosphotyrosyl phosphatase activator
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 24.2 bits (50), Expect = 7.4
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 157 ILEKPVYQQIPRSLHSFHLVSLLPKTSEV*Q 65
+ +KP+ IP+S H++++L + E+ Q
Sbjct: 46 VKDKPISASIPQSSSIEHVLNILDRVGEIKQ 76
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 23.8 bits (49), Expect = 9.8
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Frame = +1
Query: 181 YDIS-NVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSYADVSDRVE 357
Y+++ + RP + S Q+ ADT PL P S+ R + + + V +
Sbjct: 140 YNVNPDTRPSKIGPPSTSHFQILADTPRGLVPLLPPPSSSIPRSKAVTIEDPSIVRTNIY 199
Query: 358 FESYDD 375
S DD
Sbjct: 200 DPSLDD 205
>SPAC821.05 |||translation initiation factor
eIF3h|Schizosaccharomyces pombe|chr 1|||Manual
Length = 357
Score = 23.8 bits (49), Expect = 9.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -2
Query: 142 VYQQIPRSLHSFHLVSLLPKTSEV*QIHTSELTLKLSFQDC 20
V +++P +H+ HL + L + S LT + + +DC
Sbjct: 186 VIRELPIVIHNSHLATCLLHSLSEPPTPASTLTAEAALEDC 226
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 23.8 bits (49), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 186 IIYRDRCKRRFLKSRFINRFRVH 118
+IY DR F + FIN F +H
Sbjct: 104 LIYLDRIVHHFHFTVFINSFNIH 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,482,486
Number of Sequences: 5004
Number of extensions: 28863
Number of successful extensions: 82
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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