Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P07
(395 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_57764| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 28 2.4
SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_25931| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 27 4.2
SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2) 27 5.5
SB_19328| Best HMM Match : RVT_1 (HMM E-Value=2e-36) 27 5.5
SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4) 27 5.5
SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53) 27 7.3
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 27 7.3
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 26 9.6
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.6
>SB_12216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2992
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 284 GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
G G++W VS G G C +VP L I +T
Sbjct: 2663 GSMEGFWWSYVSMTTVGYGDRCPVSVPARILSIGWT 2698
>SB_57764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 88 VVVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQY 267
VV + ++ NA + +ESSF+ V + +SN LQSL P + +Y
Sbjct: 175 VVSESHDVPTNNALEIQYEEVKESSFSEVIIRTVSNNIKQCYELQSLTDPFIQDTPINEY 234
Query: 268 QPL 276
PL
Sbjct: 235 CPL 237
>SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 217 LQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFS 327
+QS+ P LT + QY PL P H S + S S
Sbjct: 39 IQSISEPPLTTSSPSQYHPLLHPVHLSTTPYYIQSIS 75
Score = 28.7 bits (61), Expect = 1.8
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 127 ESVDKPAFQESSFASV-PVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHFSMA 303
+S+ +P SS + P+ ++ +QS+ P LT + QY PL P H S
Sbjct: 40 QSISEPPLTTSSPSQYHPLLHPVHLSTTPYYIQSISVPPLTTSSPSQYHPLLHPVHLSTI 99
Query: 304 RPQLASFS 327
+ S S
Sbjct: 100 PYYIQSIS 107
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 217 LQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFS 327
+QS+ P LT + QY PL P H S + S S
Sbjct: 103 IQSISVPPLTTSSPSQYHPLLHPVHLSTIPYYIQSIS 139
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Frame = +1
Query: 217 LQSLPSPQLTADTSYQYQPLSIPQHF--------SMARPQLASFS 327
+QS+ P LT + QY PL P H S++ P L +FS
Sbjct: 135 IQSISVPSLTTSSPSQYHPLPHPVHLRTTLFYIQSISEPPLTTFS 179
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 284 GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEI 186
G G++W VS G G C A+VP L I
Sbjct: 36 GSMEGFWWSYVSMTTVGYGDRCPASVPARILSI 68
>SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1981
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 220 QSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSYADVSDRVEFESYDDDRTSC 390
Q P L D Q P+ P H S + + A ++D+ + DDD T+C
Sbjct: 563 QGSPVSDLDNDLDNQDSPVCNPHHASDIQDSRVNEQRNATLTDQSGDDQSDDDTTTC 619
>SB_25931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 988
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -1
Query: 260 YEVSAVNCGLGSDCRAT 210
YEV +NCGLG C T
Sbjct: 446 YEVQWINCGLGESCEPT 462
>SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38)
Length = 1215
Score = 27.5 bits (58), Expect = 4.2
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 67 VTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQS-LPSP 237
V+P TS++V + + ++++ E D P + + +S P +D P ++ S +PSP
Sbjct: 789 VSPRTSVIVEESDAESSIDEEDEDAPEYIDQVSSSPPQHD---YMPTQASVSSPVPSP 843
>SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2)
Length = 298
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +1
Query: 142 PAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLAS 321
P S + P+ ++R +QS+ P LT + QY PL P H + S
Sbjct: 205 PPTTSSPSQNHPLLHPVHLRSTLYYIQSISVPPLTTSSPSQYHPLLHPVHLRTTLYYIRS 264
Query: 322 FS 327
S
Sbjct: 265 IS 266
Score = 26.2 bits (55), Expect = 9.6
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +1
Query: 127 ESVDKPAFQESSFASV-PVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHFS 297
+S+ P SS + P+ ++R ++S+ P T + QY PL P H S
Sbjct: 231 QSISVPPLTTSSPSQYHPLLHPVHLRTTLYYIRSISEPPSTTSSPSQYHPLLHPVHLS 288
>SB_19328| Best HMM Match : RVT_1 (HMM E-Value=2e-36)
Length = 295
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -3
Query: 147 SRF--INRFRVHCIRFIWFHYYQRRQRCDKFIL 55
SRF N+ R HC+ ++W + Q+R + F L
Sbjct: 3 SRFQATNKLRNHCLGYLWPNACQQRSDAESFTL 35
>SB_19363| Best HMM Match : Neuromodulin (HMM E-Value=1.4)
Length = 361
Score = 27.1 bits (57), Expect = 5.5
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 91 VVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQ-- 264
+VKP ETN + +VD F S+ +S +DI + G + P A ++
Sbjct: 283 IVKPRETNTFASFTVDDTFFYPSTGSS---FDIEDRPMGVSSPFDTIQPTQEAQVLHESP 339
Query: 265 YQPLSIPQHF 294
Y P S P F
Sbjct: 340 YDPFSTPFDF 349
>SB_39016| Best HMM Match : Extensin_2 (HMM E-Value=0.53)
Length = 287
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 169 SVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHF 294
SVP S+VR T Q + +SY Y P + P ++
Sbjct: 131 SVPSTSPSSVRSATPYYPQTQQQQSSVSSSYSYYPRAAPSYY 172
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 76 LTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLT 246
+TSL V +PN T+A NA K + + + D N V S+ P +T
Sbjct: 1713 VTSLNVTQPNITDAGNA---TKANVTSRNVTQLSITDAGNATQANVTSHSVTQPNIT 1766
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 220 QSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFS 327
Q LP P T+ ++ P S+P MA+P L S S
Sbjct: 172 QGLPLPGNTSHMTHSRPPHSLPGPVLMAQPGLMSVS 207
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 52 LKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSL- 228
+K T L S V NE+ + + +++ ++ S+P + N P TV++ S+
Sbjct: 1134 VKESTTTLLLSSSSVPLNESTSNASVAINSTVQASTTIYSLPPTSMLNSTPATVSIDSIA 1193
Query: 229 PSPQLTADTS 258
PSP +S
Sbjct: 1194 PSPTTPPSSS 1203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,958,609
Number of Sequences: 59808
Number of extensions: 212622
Number of successful extensions: 622
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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