Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P07
(395 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g58340.1 68414.m06636 MATE efflux protein-related contains Pf... 35 0.023
At5g19700.1 68418.m02343 MATE efflux protein-related contains Pf... 34 0.030
At4g23030.1 68417.m03321 MATE efflux protein-related contains Pf... 33 0.069
At4g29140.1 68417.m04170 MATE efflux protein-related several hyp... 31 0.21
At3g51550.1 68416.m05645 protein kinase family protein contains ... 31 0.21
At4g35930.1 68417.m05111 expressed protein 28 2.6
At2g38510.1 68415.m04732 MATE efflux protein-related contains Pf... 28 2.6
At5g52050.1 68418.m06460 MATE efflux protein-related contains Pf... 27 3.4
At5g27300.1 68418.m03260 pentatricopeptide (PPR) repeat-containi... 27 3.4
At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger) fa... 27 3.4
At5g47000.1 68418.m05793 peroxidase, putative 27 4.5
At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR... 27 4.5
At3g46810.1 68416.m05081 DC1 domain-containing protein contains ... 27 4.5
At4g32850.6 68417.m04675 nucleotidyltransferase family protein c... 27 6.0
At4g32850.5 68417.m04674 nucleotidyltransferase family protein c... 27 6.0
At4g32850.4 68417.m04671 nucleotidyltransferase family protein c... 27 6.0
At4g32850.3 68417.m04673 nucleotidyltransferase family protein c... 27 6.0
At4g32850.2 68417.m04672 nucleotidyltransferase family protein c... 27 6.0
At4g32850.1 68417.m04676 nucleotidyltransferase family protein c... 27 6.0
At4g15730.1 68417.m02394 expressed protein 27 6.0
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 27 6.0
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 27 6.0
At4g12450.1 68417.m01970 expressed protein 26 7.9
>At1g58340.1 68414.m06636 MATE efflux protein-related contains Pfam
profile: PF01554 uncharacterized membrane protein family
UPF0013
Length = 532
Score = 34.7 bits (76), Expect = 0.023
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 302 AIEKC*GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
AI C + W+WYE + CGL ++ RATV + + I T
Sbjct: 287 AIPTCVSVCLEWWWYEFMIILCGLLANPRATVASMGILIQTT 328
>At5g19700.1 68418.m02343 MATE efflux protein-related contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 508
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 302 AIEKC*GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
AI C G+ W+WYE+ V CGL D V + + I T
Sbjct: 265 AIPSCIGVCLEWWWYEIMTVLCGLLIDPSTPVASMGILIQTT 306
>At4g23030.1 68417.m03321 MATE efflux protein-related contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 502
Score = 33.1 bits (72), Expect = 0.069
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 302 AIEKC*GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
AI C + W+WYE+ + CGL + +ATV + + I T
Sbjct: 262 AIPSCVSVCLEWWWYEIMILLCGLLLNPQATVASMGILIQTT 303
>At4g29140.1 68417.m04170 MATE efflux protein-related several
hypothetical proteins - Arabidopsis thaliana; contains
Pfam profile PF01554: Uncharacterized membrane protein
family
Length = 532
Score = 31.5 bits (68), Expect = 0.21
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 269 WYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
W+WYE+ V CGL + R+TV + + I T
Sbjct: 296 WWWYEIMIVLCGLLVNPRSTVAAMGVLIQTT 326
>At3g51550.1 68416.m05645 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 895
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 115 AVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQP 273
A++ V+KP + +S V ++ ++ +P PQ+TAD S +P
Sbjct: 385 ALHPNPVNKPEYYDSLLNGVEIFKMNTSDGNLAGTNPIPGPQVTADPSKVLRP 437
>At4g35930.1 68417.m05111 expressed protein
Length = 321
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +1
Query: 103 NETNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSI 282
NE D + + VPV+DI + R +A++ L SP+ + P+++
Sbjct: 48 NELGKKRVPVFDTKSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPK----SPLMLSPVNV 103
Query: 283 PQHFSMARP 309
+ ++ RP
Sbjct: 104 VKRSTLVRP 112
>At2g38510.1 68415.m04732 MATE efflux protein-related contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 486
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 269 WYWYEVSAVNCGLGSDCRATVPGLTLEISYTG 174
++WYE+ CGL + +A+V + + I TG
Sbjct: 247 YWWYEIMLFLCGLLGNPKASVAAMGILIQTTG 278
>At5g52050.1 68418.m06460 MATE efflux protein-related contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 505
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 302 AIEKC*GIDNGWYWYEVSAVNCGLGSDCRATVPGLTLEISYT 177
AI C + W+ YE+ + CG D +A+V + + I T
Sbjct: 270 AIPSCISVCLEWWCYEIMILLCGFLLDPKASVASMGILIQIT 311
>At5g27300.1 68418.m03260 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 510
Score = 27.5 bits (58), Expect = 3.4
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 67 VTPLTSLVVVKPNETNAVNAESVDKPAFQ-ESSFASVPVYDISNVRPGTVALQSLPSPQL 243
+ P+T L + PN T++ S P Q E S +S + D+S + G +A+ S +L
Sbjct: 22 IPPITRLSLPNPNFTSSRFHTSSSLPQSQIEGSISSSLLQDLSIIH-GVIAIASTSQGRL 80
Query: 244 TADTSYQYQPLSIPQHFSMARPQLASFSSYADVSDRVEFE 363
+ + S+P R SS + + +F+
Sbjct: 81 ASVSMCTQYSTSVPTRSLRRRISSRKKSSTKPILNESKFQ 120
>At5g07225.1 68418.m00824 zinc finger (C3HC4-type RING finger)
family protein similar to SP:O54965 RING finger protein
13 {Mus musculus} RING zinc finger protein
Length = 234
Score = 27.5 bits (58), Expect = 3.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 385 RYGHHHNFQIQPCLRHQR 332
R G+HH FQ QP RH++
Sbjct: 78 RSGYHHQFQNQPNTRHRQ 95
>At5g47000.1 68418.m05793 peroxidase, putative
Length = 334
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = -2
Query: 157 ILEKPVYQQIPRSLHSFHLVSLLPKTSEV*QIHTSELTLKLSFQDCFPYSC 5
IL YQ+ H +V T +V Q T+ TL+L F DCF C
Sbjct: 32 ILRTDYYQKTCPDFHK--IVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGC 80
>At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1039
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -2
Query: 172 PMQTKILEKP--VYQQIPRSLHSFHLVSLLPKTSEV*QIHTSELTLKLSFQDCFPYSCL 2
P + K L KP +Y + R++ H+V + K + + + LKL D +P L
Sbjct: 499 PSEQKFLWKPEEIYDVLARNIFLKHVVDITSKLQLISDVSSITHGLKLLHWDAYPLETL 557
>At3g46810.1 68416.m05081 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 686
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = -2
Query: 229 GVIAELRFLV*RWKYHIQGPMQTKILEKPVYQQIPRSLHSFHLVSLLPKTS 77
GV + +V + YH+ GP+ T + E Y+ +P ++ S L ++P TS
Sbjct: 596 GVTLHVSCVVGDFSYHMPGPLSTVVSE---YKMVPPAVVS--LYKVVPNTS 641
>At4g32850.6 68417.m04675 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 745
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g32850.5 68417.m04674 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 745
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g32850.4 68417.m04671 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 730
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g32850.3 68417.m04673 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 735
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g32850.2 68417.m04672 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 738
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g32850.1 68417.m04676 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain
Length = 741
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 271 PLSIPQHFSMARPQLASFSSYADVSDRVEFESY 369
PL+ P+ + + +P + S AD+ VE E Y
Sbjct: 14 PLNSPKSYGITKPLSLAGPSSADIKRNVELEKY 46
>At4g15730.1 68417.m02394 expressed protein
Length = 1059
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 142 PAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTA 249
P+ Q SS + V ISN PG +Q SP T+
Sbjct: 74 PSCQRSSLGNHAVQRISNSLPGKNVVQKFQSPPATS 109
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 491
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 382 YGHHHNFQIQPCLRHQRTRRMKR 314
+ HHH+ + L Q+ RRM+R
Sbjct: 239 HNHHHDLSVAQDLEDQKIRRMRR 261
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 214 ALQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFSSYADVSDRV 354
+L S PS L S+Q+Q S+ H +S+ S VSD++
Sbjct: 35 SLLSQPSLPLVPSLSFQHQSSSVDHHCLATLKDKSSYVSSLAVSDKL 81
>At4g12450.1 68417.m01970 expressed protein
Length = 277
Score = 26.2 bits (55), Expect = 7.9
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +1
Query: 178 VYDISNVRPGTVALQSLPSPQLTADTSYQYQPLSIPQHFSMARPQLASFSS 330
V D+ N +PGTV P P L S + L H R A SS
Sbjct: 40 VRDVVNTQPGTVKKNPKPDPSLRRLCSSRRPELDSNSHHPTRRSVSARASS 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.126 0.348
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,591,457
Number of Sequences: 28952
Number of extensions: 144614
Number of successful extensions: 382
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 565902384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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