Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_P05
(289 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0905 + 32880368-32880633,32882439-32882568,32882704-328828... 28 1.1
05_07_0291 - 29020032-29020660,29020747-29020817,29021020-290211... 28 1.4
09_04_0160 + 15226762-15227032,15227138-15227373,15227469-152275... 27 1.8
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 27 1.8
04_03_0792 + 19693957-19694146,19695614-19696260 27 2.4
02_04_0023 - 19000591-19001234,19003322-19003496 27 2.4
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433... 27 3.2
01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 26 4.2
05_01_0455 - 3614011-3614503,3615007-3615072,3615154-3615347,361... 26 5.6
04_03_0704 + 18872899-18874191 26 5.6
01_06_1793 - 39916024-39916824 26 5.6
02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,336... 25 7.4
09_03_0013 - 11522505-11522901,11522993-11523182,11523513-115235... 25 9.8
05_07_0285 + 28982502-28982782,28982888-28982989,28983189-289840... 25 9.8
04_04_0487 - 25585229-25585540,25585627-25585745,25586029-255861... 25 9.8
03_02_0044 - 5245204-5245538,5245946-5246093,5246182-5247395,524... 25 9.8
>01_06_0905 +
32880368-32880633,32882439-32882568,32882704-32882894,
32883625-32883852,32884062-32884224,32884343-32884416,
32884484-32884601,32884722-32884788,32885152-32885223,
32885350-32885513
Length = 490
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 138 LAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 43
+A +VD ++G P + G+ T + G PP+
Sbjct: 71 VAGVVDFPVEGSANPFMVGLYFTRVKLGSPPK 102
>05_07_0291 -
29020032-29020660,29020747-29020817,29021020-29021194,
29021451-29021571,29021686-29022036
Length = 448
Score = 27.9 bits (59), Expect = 1.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 123 DISIDGKTIPVLTGVTMTNIW 61
D S D +PV+ GVT+ N+W
Sbjct: 360 DASYDPSKLPVVDGVTIKNVW 380
>09_04_0160 +
15226762-15227032,15227138-15227373,15227469-15227565,
15227657-15227783,15227870-15228482,15228572-15228835,
15228918-15229130,15229253-15229460,15229552-15229748,
15229830-15230183,15230287-15230874
Length = 1055
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 28 CYSRNPRRFASPDVRHRDSRQDRYGFTIN*YVY--YEGEIRLSVECMFRHNA 177
CY + P+RF DV R + ++ F IN +G + + C+FR A
Sbjct: 581 CYVQFPQRFDGIDVHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQA 632
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -2
Query: 249 TSVNFMCFVKKVGI*ISLSKGNPRGIVSKHTLHRQAYLAFIVDISIDGKTI 97
T NF FVK GI G+PR + T ++ LA +IS+ K +
Sbjct: 254 THANFRTFVKSAGIDFYPLGGDPRILAQYMTKNKGFCLAGPTEISVQRKQL 304
>04_03_0792 + 19693957-19694146,19695614-19696260
Length = 278
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 180 RGIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRVTE 25
R +V K L A + S++ + G T+T WRGKP + R TE
Sbjct: 134 RLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE 185
>02_04_0023 - 19000591-19001234,19003322-19003496
Length = 272
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 180 RGIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRVTE 25
R +V K L A + S++ + G T+T WRGKP + R TE
Sbjct: 128 RLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTE 179
>05_04_0149 - 18441561-18442082,18442723-18442861,18443295-18443352,
18443630-18443664,18444528-18444886,18445304-18445450,
18445849-18447954,18448300-18448494,18448629-18448709,
18448758-18448874,18449281-18449370,18449466-18449552,
18450293-18450315,18450675-18450804
Length = 1362
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 8 WLSAQASVTLGTLGGLPLQMFVIVTPVKTGMVLPSIDMS--TMKARYACRWSVCFDTMPL 181
W AQ+ T+ T LQ TP++ P+ D + T + F T+P
Sbjct: 1239 WSVAQSETTIQTSVAHGLQ-HTRPTPLRQPASSPANDKTATTPVTLASALTQAAFTTLPA 1297
Query: 182 GFPFDREIYMP 214
GFP + +++ P
Sbjct: 1298 GFPVESDLWEP 1308
>01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547
Length = 388
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 229 FCEES-RHINFPIEGESKGHCVETYTPPTSVSRLH 128
FC + R PIE E++ + +PP+S S LH
Sbjct: 342 FCSANCRDQQIPIEEEAENNTTIVSSPPSSCSSLH 376
>05_01_0455 -
3614011-3614503,3615007-3615072,3615154-3615347,
3615562-3615657,3615790-3615829,3616729-3616856
Length = 338
Score = 25.8 bits (54), Expect = 5.6
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 16 RTGFCYSRNPRRFASPDVRHRDSRQDRYGFTIN*YVYYEGEIRLSVECMFRHNAP 180
R G YSR+PRR SP R+ RY N Y+G R + R +P
Sbjct: 196 RDGRGYSRSPRRHDSPS-NQRNHSPRRYALPSN--ERYDGTRRYASPSYGRDRSP 247
>04_03_0704 + 18872899-18874191
Length = 430
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 117 SIDGKTIPVLTGVTMTNIWRGKPPRVPRVT 28
S+ G+T P +T++ WR + P V RVT
Sbjct: 401 SMSGRTAPWGISITLSRTWRARSPFV-RVT 429
>01_06_1793 - 39916024-39916824
Length = 266
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -1
Query: 151 PTSVSRLHSRHIN*W*NHTGLDGSHDDEHLERQTAEGSESNR 26
P + S + R+ + N +G DD+H +R G +SN+
Sbjct: 47 PWTTSEEYPRYTSDDDNRSGSGSDDDDDHGDRNRRRGKKSNK 88
>02_01_0471 - 3364215-3364912,3365511-3365742,3365827-3366198,
3366324-3366449,3367056-3367262,3367399-3367492,
3367575-3367621,3367705-3368157,3368261-3368560,
3368656-3369114,3369189-3369410,3369659-3369890,
3370051-3370422,3371210-3371322,3371682-3371903,
3371977-3372180,3372308-3372572,3373123-3373311,
3373441-3373768,3373843-3374248,3374339-3374648,
3375677-3375837,3376825-3376998,3377265-3377609,
3377713-3377754,3378585-3378734,3378847-3379002,
3379088-3379540,3379651-3379966,3380402-3380839,
3381475-3381697,3383538-3383852,3384033-3384095,
3384699-3384903,3385362-3385425,3386014-3386204
Length = 3048
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 168 SKHTLHRQAYLAFIVDISIDGKTIPVLTGV 79
+ + + R+ YL I DGK +P+L G+
Sbjct: 1361 ASYEVQRELYLLLIQYFECDGKCLPMLCGL 1390
>09_03_0013 -
11522505-11522901,11522993-11523182,11523513-11523581,
11523983-11524109,11524229-11524491,11524597-11524751,
11524906-11524983,11527737-11527808,11527888-11528026,
11528674-11529103
Length = 639
Score = 25.0 bits (52), Expect = 9.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 192 KGNPRGIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRVTEA 22
K +P S+ T+ + A ++ ++I G + + +NI+ PPRVP T A
Sbjct: 250 KTSPSSSRSRATILAISIAAPVMVVAILGLSYLIWRVKRKSNIFAYNPPRVPEPTNA 306
>05_07_0285 +
28982502-28982782,28982888-28982989,28983189-28984006,
28984594-28985050,28985203-28985242
Length = 565
Score = 25.0 bits (52), Expect = 9.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
Frame = -2
Query: 114 IDGKTIPVLTGVTMTNI------WRGKPPRVP 37
+DG T PV+TG +TN+ GKP +P
Sbjct: 75 VDGDTSPVVTGEPITNLSLSSGTTHGKPKFIP 106
>04_04_0487 -
25585229-25585540,25585627-25585745,25586029-25586194,
25586295-25586427,25586527-25586618,25586739-25586925,
25587183-25587271,25587318-25587379,25587462-25587567,
25587754-25588052,25588181-25588288,25588369-25588439,
25588792-25588871
Length = 607
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 87 TGVTMTNIWRGKPPRVPRVTEAC 19
TG+T+TN WR V T+ C
Sbjct: 419 TGITVTNGWRSNVTHVIANTDEC 441
>03_02_0044 -
5245204-5245538,5245946-5246093,5246182-5247395,
5247730-5248003,5248141-5248293
Length = 707
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 174 IVSKHTLHRQAYLAFIVDISIDGKTIP 94
I+ +LH++A AF + +SID +P
Sbjct: 599 ILQAQSLHQEALTAFSLSLSIDPDYVP 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,429,864
Number of Sequences: 37544
Number of extensions: 165598
Number of successful extensions: 407
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 304131700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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