Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P05
         (289 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    28   0.93 
Z73977-1|CAA98290.1|  573|Caenorhabditis elegans Hypothetical pr...    27   1.6  
Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical pr...    26   3.8  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical pr...    26   5.0  
AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical ...    26   5.0  

>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 28.3 bits (60), Expect = 0.93
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 88  DGSHDDEHLERQTAEGS 38
           DGSH+DEH E++   GS
Sbjct: 332 DGSHEDEHFEKKIMPGS 348


>Z73977-1|CAA98290.1|  573|Caenorhabditis elegans Hypothetical
           protein T28B11.1 protein.
          Length = 573

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 229 FCEESRHINFPIEGESKGHCVETYTPPTSVSRL 131
           +C+ SR +   IE E     V T TP +S+SRL
Sbjct: 472 YCKPSRRMVLTIEREDSPIPVTTLTPVSSLSRL 504


>Z70781-3|CAA94833.2|  352|Caenorhabditis elegans Hypothetical
           protein F57A8.5 protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 119 MSTMKARYACRWS-VCFDTMP 178
           MS  K  Y C+WS  CF+T P
Sbjct: 45  MSVQKLVYNCKWSNNCFETSP 65


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 13  FRTGFCYSRNPRRFASPDVRHRDSRQDRYGFTIN*YVYYEG 135
           F   F Y  N ++   PD++HR S   R  +T    V+Y G
Sbjct: 78  FNIYFLYKPNNQKTGRPDIKHRFS---RVSYTKPTEVFYHG 115


>Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical
           protein F14B6.2 protein.
          Length = 720

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 187 ESKGHCVETYTPPTSVSRLHSRH 119
           E K    E YTPP S+S L   H
Sbjct: 479 EKKKEAFEAYTPPISLSDLQPSH 501


>AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical
           protein Y32F6B.1 protein.
          Length = 758

 Score = 25.8 bits (54), Expect = 5.0
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = +3

Query: 153 GVYVSTQCPLDSPSI-GKFI---CLLSSQNT*SLPTCKVYRTD 269
           G  VS    L SP I GK I   CLL  ++  S  +C VY TD
Sbjct: 633 GFLVSLLATLPSPIIWGKIIDMSCLLWKKSCDSSGSCSVYDTD 675


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,100,756
Number of Sequences: 27780
Number of extensions: 141124
Number of successful extensions: 348
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 269889950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)