Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P03
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    34   0.001
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    24   0.85 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   0.85 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 33.9 bits (74), Expect = 0.001
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 37  QASDEGQYQCFAETPAGVASSRVISFRKT--YLIASPAKTHEKTPIEGRPFQLDCVQPNA 210
           Q++  G Y C A   A V +     F       I  P    +K   +G    ++C + + 
Sbjct: 669 QSTHVGNYTCLASNSASVTTYTTSLFINVPPRWILEPT---DKAFAQGSDAAVEC-KADG 724

Query: 211 YPKPLITWKKRLSGADPNADVTDF 282
           +P+P++TW KR +G  P  D  DF
Sbjct: 725 FPRPVVTW-KRATGVSP-GDYKDF 746



 Score = 32.3 bits (70), Expect = 0.003
 Identities = 36/146 (24%), Positives = 54/146 (36%), Gaps = 3/146 (2%)
 Frame = +1

Query: 7    DEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQ 186
            ++G+L     Q ++EG Y C A    G   S VI            K   +T   G P  
Sbjct: 756  EDGTLTINNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAV 815

Query: 187  LDCVQPNAYPKPL-ITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYK 363
            L C       KP+ I W       +P  D   +  R     +G L    + + + SD   
Sbjct: 816  LQCEAKG--EKPIGILWNINNKRLEPKGD-NRYTIREEILANGVLSGLSIKRTERSDSAL 872

Query: 364  SVCTAKNA--AVDEEVVLVEYEIKGV 435
              C A NA  + D  + ++  E+  V
Sbjct: 873  FTCVATNAFGSDDTSINMIVQEVPEV 898



 Score = 25.4 bits (53), Expect = 0.37
 Identities = 21/87 (24%), Positives = 31/87 (35%)
 Frame = +1

Query: 13  GSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLD 192
           G+L+    +  D G+Y C      G  S   +    T  + +  +   +T   GRP    
Sbjct: 290 GTLIIREAKVEDSGKYLCVVNNSVGGESVETV-LTVTAPLKAKIEPQVQTIDFGRPATFT 348

Query: 193 CVQPNAYPKPLITWKKRLSGADPNADV 273
           C      P   I+W K     D N  V
Sbjct: 349 C-NFEGNPIKTISWLKDGHPIDHNEAV 374


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 90  CQLEGDQLQEDLPHRIASEDTRENANRRQ 176
           C  EG++L++D+P  + +E  + N   ++
Sbjct: 52  CTPEGEELKKDIPDALQNECAKCNEKHKE 80


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 90  CQLEGDQLQEDLPHRIASEDTRENANRRQ 176
           C  EG++L+ D+P  + +E  + N   ++
Sbjct: 53  CTPEGEELKRDIPEALQNECAKCNEKHKE 81


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 90  CQLEGDQLQEDLPHRIASEDTRENANRRQ 176
           C  EG++L++D+P  + +   + N   ++
Sbjct: 53  CTPEGEELKKDIPEALQNGCAKCNEKHKE 81


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 90  CQLEGDQLQEDLPHRIASEDTRENANRRQ 176
           C  EG++L++D+P  + +   + N   ++
Sbjct: 53  CTPEGEELKKDIPEALQNGCAKCNEKHKE 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 317 RFPSGPAVMRRSKSVTS 267
           R+PSGP +  RS + T+
Sbjct: 36  RYPSGPELSDRSAAYTN 52


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 121 TYLIASPAKTHEKTPIEGRPF 183
           T+      K H+KTP   RP+
Sbjct: 291 THKYTHEIKLHDKTPFLKRPY 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,382
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)