Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_P01
         (549 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              38   9e-05
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   1.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 37.5 bits (83), Expect = 9e-05
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = +3

Query: 9   GRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 155
           G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 90  GKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 282 MRDWLFNIMRDLAERRELTPHYLRMEREAESNLTRRWTNAG 404
           +R W  N+M + + R    P  +  E   E NLT ++  +G
Sbjct: 268 LRSWR-NLMDEHSNRTNSDPRMILTEAYTEFNLTIKYYKSG 307


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -1

Query: 168 GRG---RGSAVGTPRSPMTRSR*SL 103
           GRG    GS  G+PRSP + SR S+
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSRCSV 334


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +3

Query: 219 YGTCREMPEC--SENEMSDFPRRMRDWLFNIMRDLAERR 329
           +  C ++ E   S NE++  P  +RD       DL E R
Sbjct: 427 FRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENR 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,412
Number of Sequences: 438
Number of extensions: 3236
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)