Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O20
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 206 8e-54
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 29 1.3
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 29 1.3
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 29 1.3
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 2.3
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 2.3
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 2.3
Z99288-2|CAB16547.1| 353|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 27 5.3
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 27 5.3
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 27 5.3
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 27 5.3
Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z71258-5|CAA95784.2| 452|Caenorhabditis elegans Hypothetical pr... 27 7.0
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.3
U61956-3|ABA03115.1| 402|Caenorhabditis elegans Hypothetical pr... 27 9.3
U61956-2|ABA03113.1| 440|Caenorhabditis elegans Hypothetical pr... 27 9.3
U61956-1|ABA03114.1| 408|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical... 27 9.3
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 206 bits (502), Expect = 8e-54
Identities = 96/158 (60%), Positives = 115/158 (72%)
Frame = +3
Query: 6 VNICFGRHHVLNWMMFGLNGAEIVFNPSATIAAEAGSEYMWNIEARNAAITNCYFTAAIN 185
+NIC+GRHH NWMM+ LNGAEI+FNPSAT+ A SE +W IEARNAAI N FT IN
Sbjct: 232 INICYGRHHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIEARNAAIANHVFTVGIN 289
Query: 186 RVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLISVMDLNMN 365
RVG E FPNEFTS +G+PAHKD G FYGSSY PDG R P LSR R+G+LI+ +DLN+
Sbjct: 290 RVGTEVFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALSRVREGVLIAELDLNLC 349
Query: 366 RQIKDRRCYYMTQRLDMYADXLRKVLDLDYEPQVVHEK 479
RQ KD + MT RLDMYA + +V + DY P + E+
Sbjct: 350 RQCKDAWGFRMTNRLDMYAQKITEVSNPDYRPDIRREQ 387
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 293 IRSTEVTGPVEQPQVFVRGLPVSRSELIREFLITDPVDSRRE 168
+ + + G ++QPQ + +S + L L T P++SR E
Sbjct: 340 VHESSLAGSIQQPQQDLEETAISENRLSHSTLKTTPIESRNE 381
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 293 IRSTEVTGPVEQPQVFVRGLPVSRSELIREFLITDPVDSRRE 168
+ + + G ++QPQ + +S + L L T P++SR E
Sbjct: 340 VHESSLAGSIQQPQQDLEETAISENRLSHSTLKTTPIESRNE 381
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 293 IRSTEVTGPVEQPQVFVRGLPVSRSELIREFLITDPVDSRRE 168
+ + + G ++QPQ + +S + L L T P++SR E
Sbjct: 340 VHESSLAGSIQQPQQDLEETAISENRLSHSTLKTTPIESRNE 381
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 293 IRSTEVTGPVEQPQVFVRGLPVSRSELIREFLITDPVDSRRE 168
+ + + G ++QPQ + +S + L L T P++SR E
Sbjct: 33 VHESSLAGSIQQPQQDLEETAISENRLSHSTLKTTPIESRNE 74
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 243 HKDLGLFYGSSYF--CGPDGVRCPGLSRTRDGLLISVMDLNMNR 368
H++ L GSS C G PG+S RDGL I + D +++
Sbjct: 431 HQNQTLMVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 243 HKDLGLFYGSSYF--CGPDGVRCPGLSRTRDGLLISVMDLNMNR 368
H++ L GSS C G PG+S RDGL I + D +++
Sbjct: 431 HQNQTLMVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 243 HKDLGLFYGSSYF--CGPDGVRCPGLSRTRDGLLISVMDLNMNR 368
H++ L GSS C G PG+S RDGL I + D +++
Sbjct: 431 HQNQTLMVGSSAILPCQASGKPTPGISWLRDGLPIDITDSRISQ 474
>Z99288-2|CAB16547.1| 353|Caenorhabditis elegans Hypothetical
protein ZK262.2 protein.
Length = 353
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 229 TGSPRTKTWGCSTGPVTSVDLMESGARDCR 318
TG PR + +GCS P +D G D R
Sbjct: 278 TGLPRNEDFGCSNAPKVDLDDTNQGVWDHR 307
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 WMMFGLNGAEIVFNPSATIAAEA-GSEYMWNIEARNAAITNCYFTAAINRVGYEEF 206
WM FG +G NP A A G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 WMMFGLNGAEIVFNPSATIAAEA-GSEYMWNIEARNAAITNCYFTAAINRVGYEEF 206
WM FG +G NP A A G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 WMMFGLNGAEIVFNPSATIAAEA-GSEYMWNIEARNAAITNCYFTAAINRVGYEEF 206
WM FG +G NP A A G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 42 WMMFGLNGAEIVFNPSATIAAEA-GSEYMWNIEARNAAITNCYFTAAINRVGYEEF 206
WM FG +G NP A A G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>Z82060-6|CAB04887.1| 301|Caenorhabditis elegans Hypothetical
protein T27F6.8 protein.
Length = 301
Score = 27.1 bits (57), Expect = 7.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 380 IFDLPVHIQIHNADQQS 330
IFD+P+H+ +H DQ S
Sbjct: 51 IFDMPMHLMLHVIDQMS 67
>Z71258-5|CAA95784.2| 452|Caenorhabditis elegans Hypothetical
protein C01H6.6 protein.
Length = 452
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 276 YFCGPDGVRCPGLSRTRDGLLISVMDLNMN 365
YF P V C GLS T GL +++M ++N
Sbjct: 97 YFMMPLLVLCLGLSATFSGLNLAIMSFSIN 126
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 160 IATSRRLSTGSVMRNSRMSSLRLTGSPRTKTWGCSTGPVTSVDLMESG 303
+A + + + + + ++ G+ KT G PVT+ DL+E G
Sbjct: 181 VAAAEENADAAAQKEVQKKNIDAFGAWAQKTLGTEAAPVTNEDLLEKG 228
>U61956-3|ABA03115.1| 402|Caenorhabditis elegans Hypothetical
protein R13H7.2c protein.
Length = 402
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 160 LVIAAFLASIFHIYSLPASAAMVADGLNTISAPFN 56
+++ +FL + FH + AM+ +G +P N
Sbjct: 167 IILGSFLLTFFHTFEYKYGYAMIRNGTKLYGSPVN 201
>U61956-2|ABA03113.1| 440|Caenorhabditis elegans Hypothetical
protein R13H7.2a protein.
Length = 440
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 160 LVIAAFLASIFHIYSLPASAAMVADGLNTISAPFN 56
+++ +FL + FH + AM+ +G +P N
Sbjct: 205 IILGSFLLTFFHTFEYKYGYAMIRNGTKLYGSPVN 239
>U61956-1|ABA03114.1| 408|Caenorhabditis elegans Hypothetical
protein R13H7.2b protein.
Length = 408
Score = 26.6 bits (56), Expect = 9.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 160 LVIAAFLASIFHIYSLPASAAMVADGLNTISAPFN 56
+++ +FL + FH + AM+ +G +P N
Sbjct: 173 IILGSFLLTFFHTFEYKYGYAMIRNGTKLYGSPVN 207
>AC025716-18|AAT81178.1| 998|Caenorhabditis elegans Hypothetical
protein Y39G10AR.3 protein.
Length = 998
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 206 EFLITDPVDSRREVAISYSSISCFDIPHILTSRF 105
+FL+T P+++ ++ ++ S+S I L SRF
Sbjct: 101 DFLLTTPIENASQICLAVQSVSKKKISVRLVSRF 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,630,373
Number of Sequences: 27780
Number of extensions: 248110
Number of successful extensions: 637
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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