Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O17
         (555 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g53970.1 68416.m05963 proteasome inhibitor-related similar to...    32   0.22 
At3g09000.1 68416.m01053 proline-rich family protein                   30   0.90 
At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containi...    30   1.2  
At3g57630.2 68416.m06421 exostosin family protein contains Pfam ...    29   1.6  
At3g57630.1 68416.m06420 exostosin family protein contains Pfam ...    29   1.6  
At5g01950.1 68418.m00114 leucine-rich repeat transmembrane prote...    29   2.8  
At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein si...    29   2.8  
At1g64140.1 68414.m07266 expressed protein similar to putative d...    28   3.6  
At1g15190.1 68414.m01816 hypothetical protein                          28   3.6  
At3g43520.1 68416.m04614 expressed protein contains Pfam profile...    28   4.8  
At3g10650.1 68416.m01281 expressed protein                             28   4.8  
At5g09670.2 68418.m01119 loricrin-related contains weak similari...    27   6.4  
At5g09670.1 68418.m01118 loricrin-related contains weak similari...    27   6.4  
At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /...    27   6.4  
At2g32660.1 68415.m03992 disease resistance family protein / LRR...    27   6.4  
At5g64550.1 68418.m08112 loricrin-related contains weak similari...    27   8.4  
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative...    27   8.4  
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic...    27   8.4  

>At3g53970.1 68416.m05963 proteasome inhibitor-related similar to
           proteasome inhibitor PI31 subunit (hPI31) SP:Q92530 from
           [Homo sapiens]
          Length = 302

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 18/50 (36%), Positives = 19/50 (38%)
 Frame = +1

Query: 118 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG 267
           P     P    +D YG   V G  P G      PR   GG P  E  PGG
Sbjct: 250 PHPGMPPPGARFDPYGPPGVPGFEP-GRFTRQPPRGPGGGHPDLEHFPGG 298


>At3g09000.1 68416.m01053 proline-rich family protein
          Length = 541

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 20/60 (33%), Positives = 28/60 (46%)
 Frame = +3

Query: 357 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTRPGHRTARCTDSAASASNTRS 536
           +  P  S     T + S + S +  ++ TL A  A TST     T   + SA SA+ TRS
Sbjct: 166 STTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSSGSARSATPTRS 225


>At4g22670.1 68417.m03272 tetratricopeptide repeat (TPR)-containing
           protein similar to Hsc70-interacting protein (Hip) from
           {Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503;
           contains Pfam profile PF00515: tetratricopeptide repeat
           (TPR) domain
          Length = 441

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 163 GAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*E-SSCLRDPE*VTRCS 315
           G   +GG  P G    G P    GG PG   +PGG + S  L DPE +T  S
Sbjct: 349 GMPGMGGGMPAGMGGGGMPGAG-GGMPGGGGMPGGMDFSKILNDPELMTAFS 399


>At3g57630.2 68416.m06421 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 791

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = +2

Query: 299 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 475
           +  DA   ++ + + C  K  C  GR CEI       C C+ +C      R   C     
Sbjct: 240 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 295

Query: 476 TWSSDCEV 499
            + +DC +
Sbjct: 296 WFGTDCSI 303


>At3g57630.1 68416.m06420 exostosin family protein contains Pfam
           profile: PF03016 exostosin family
          Length = 793

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = +2

Query: 299 ESRDAPDNEINLDDPC-MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNE 475
           +  DA   ++ + + C  K  C  GR CEI       C C+ +C      R   C     
Sbjct: 242 DPEDAYAMKVKIKEECDCKYDCLWGRFCEIPVQ----CTCVNQCSGHGKCRGGFCQCDKG 297

Query: 476 TWSSDCEV 499
            + +DC +
Sbjct: 298 WFGTDCSI 305


>At5g01950.1 68418.m00114 leucine-rich repeat transmembrane protein
           kinase, putative receptor protein kinases
          Length = 1032

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 339 SSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSR 217
           S R  SL GA  D  +I   + L  SWN L+  + +  FS+
Sbjct: 334 SLRNCSLKGALPDFSKIRHLKYLDLSWNELTGPIPSSNFSK 374


>At3g26720.1 68416.m03341 glycosyl hydrolase family 38 protein
           similar to lysosomal alpha-mannosidase GI:3522867 from
           [Homo sapiens]
          Length = 1019

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 218 LENGMAESLDERRFQEAERARVSEILNESRDAPD 319
           LENG  E +  RR Q  +   V EILNE+   P+
Sbjct: 794 LENGQIELMLHRRMQHDDIRGVGEILNETVCLPE 827


>At1g64140.1 68414.m07266 expressed protein similar to putative
           disease resistance protein GB:CAB40943 GI:4586107 from
           [Arabidopsis thaliana]; weak similarity to Loricrin
           (Swiss-Prot:P23490) [Homo sapiens]
          Length = 646

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
 Frame = -2

Query: 383 SHRHGRRCSALSCTD--RQD*FHCQEH----RVTHSGSRRHELSQPPGIVSRPGSPPCRS 222
           SH  GRRC +  CT   +     C+ H    R THSG  +      P      G   C  
Sbjct: 377 SHGGGRRCQSNGCTKGAQGSTMFCKAHGGGKRCTHSGCTKGAEGSTPFCKGHGGGKRCAF 436

Query: 221 RG 216
           +G
Sbjct: 437 QG 438


>At1g15190.1 68414.m01816 hypothetical protein
          Length = 248

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = -1

Query: 348 MHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDSEMSPRGSPA 178
           +HG + L+ L+  S  +  + ++ AL+ S   L SR S  P    +  ++SP  SP+
Sbjct: 159 VHGLADLLPLTAPSSPNRLVEDSTALAKSPWFLGSRFSPAPEPYFAFMDLSPAESPS 215


>At3g43520.1 68416.m04614 expressed protein contains Pfam profile
           PF03647: Uncharacterised protein family (UPF0136)
          Length = 240

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +3

Query: 357 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTR--PGHRTARCTDSAASA 521
           TA+P  SVR  ++      A  S H +  LGA     ST+      TA C DS   A
Sbjct: 29  TASPIRSVRFQNSNGFHPLAFASGHRRLPLGAVVPSDSTKTITSTITANCVDSGVKA 85


>At3g10650.1 68416.m01281 expressed protein
          Length = 1309

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +3

Query: 384  STSTGKLSATASRSVHTKPTLGARCAQTSTRPGHRTARCTDSAASASNTRSCAA 545
            +TST K    AS    T    GA+ A+  +RPG      +    S  N  + AA
Sbjct: 863  NTSTFKFGGMASADQSTGIVFGAKSAENKSRPGFVFGSSSVVGGSTLNPSTAAA 916


>At5g09670.2 68418.m01119 loricrin-related contains weak similarity
           to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
          Length = 546

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -2

Query: 383 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 204
           +H  G+RC  L CT   +     +  ++H G RR E  +     +R  S  C   G   +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255

Query: 203 RC 198
           RC
Sbjct: 256 RC 257


>At5g09670.1 68418.m01118 loricrin-related contains weak similarity
           to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
          Length = 546

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -2

Query: 383 SHRHGRRCSALSCTDRQD*FHCQEHRVTHSGSRRHELSQPPGIVSRPGSPPCRSRGAPTR 204
           +H  G+RC  L CT   +     +  ++H G RR E  +     +R  S  C   G   +
Sbjct: 199 THGGGKRCEHLGCTKSAE--GKTDFCISHGGGRRCEFLEGCDKAARGRSGLCIKHGG-GK 255

Query: 203 RC 198
           RC
Sbjct: 256 RC 257


>At3g15820.1 68416.m02002 phosphatidic acid phosphatase-related /
           PAP2-related contains Pfam profile PF01569: PAP2
           superfamily
          Length = 301

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 SEHLENGMAESLDERRFQEAERARVSEILN 298
           S H+   M  SLD RR Q    A V +ILN
Sbjct: 214 SGHVAGSMIASLDMRRMQRLRLAMVFDILN 243


>At2g32660.1 68415.m03992 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Cf-4
           [Lycopersicon hirsutum] gi|2808683|emb|CAA05268
          Length = 589

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 118 PKTSSTPSALTYDDYGAADVGGASPRGHLRVGAPRERHGGEPGRETIPGG*ESSCLRD 291
           P+     S L Y D     + G  P+G   +G P+    G  G   +P   E SCLR+
Sbjct: 472 PQELGRLSYLAYIDVSDNQLTGKIPQGTQIIGQPKSSFEGNSGLCGLP--LEESCLRE 527


>At5g64550.1 68418.m08112 loricrin-related contains weak similarity
           to Loricrin (Swiss-Prot:P23490) [Homo sapiens]
          Length = 634

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +2

Query: 329 NLDDPCMKVHC---SAGRVCEINEHGEAICNCIKECP 430
           N  D  + + C   SAGR+   + H   +C+ +  CP
Sbjct: 21  NFGDTALSLKCLGSSAGRLIGSSHHNHKLCSDVSNCP 57


>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
            microtubule-associated motor KIF4 , Mus musculus,
            PIR:A54803
          Length = 1294

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
 Frame = +2

Query: 182  GLPRGDISESEHLENG----MAESLDERRFQEAERARVSEIL-NESRDAPDNEINLD 337
            G     ISESE LENG     ++  D+ + Q+   +R + +L N   D P+ E N D
Sbjct: 1100 GKENNSISESEALENGENSQESDEKDKGQQQQVLASRGAMLLQNALADKPEEETNDD 1156


>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
           to gi|10880497|gb|AAG24278; supported by Ceres cDNA
           265772
          Length = 127

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 357 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTSTRPGHRTARCTDSAASASNTRS 536
           TAAP  S+  T T   SAT + +    P  G+    +++ P   T+   D A  A  T S
Sbjct: 42  TAAPTPSITPTPTPTPSATPT-AAPVSPPAGSPLPSSASPPAPPTSLTPDGAPVAGPTGS 100


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,430,021
Number of Sequences: 28952
Number of extensions: 228271
Number of successful extensions: 817
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1053014392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)