Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O16
(260 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 30 0.058
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 27 0.41
SPAC11E3.06 |map1||MADS-box transcription factor Map1|Schizosacc... 27 0.54
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 0.54
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 26 0.72
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 25 1.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 25 2.2
SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subuni... 24 2.9
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 24 3.8
SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces... 24 3.8
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 23 5.1
SPCC5E4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 23 5.1
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 23 6.7
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 23 6.7
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 23 6.7
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 23 6.7
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 23 6.7
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 23 6.7
SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyce... 23 6.7
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 23 8.8
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 29.9 bits (64), Expect = 0.058
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMR 160
+N A+ R+R KKK + + L + L + + L + +L+ E ++KGL+R
Sbjct: 273 RNTAASARFRIKKKLKEQQLERTAKELTEKVAILETRVRELEMENNWLKGLIR 325
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 27.1 bits (57), Expect = 0.41
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIK 148
+N+ AA+++RQKKK ++ L A + L S LQ+E +K
Sbjct: 19 RNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLK 67
>SPAC11E3.06 |map1||MADS-box transcription factor
Map1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 26.6 bits (56), Expect = 0.54
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 18 PPATAKRKRLRSRSFLTRNRP 80
PP+T K +R ++SF TR+ P
Sbjct: 271 PPSTYKHRRSLNKSFATRSEP 291
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 26.6 bits (56), Expect = 0.54
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKA 175
+ ++A T+Y KAE+EV ++ KH E+ + LQ + + + DL ++
Sbjct: 525 EREHALTKYESSLKAELEVYKQIKEIYGKHSVEVLTEDKHLQVKQTKLTQKLEDLIES 582
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 26.2 bits (55), Expect = 0.72
Identities = 13/55 (23%), Positives = 31/55 (56%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRDL 166
QN+ A +R++K+ ++ L + L++ HS + L++++R ++ +R L
Sbjct: 85 QNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRIL 139
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.0 bits (52), Expect = 1.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQ 127
+N+ + + K+KAE L ++ + LR+ SEL K DL+
Sbjct: 285 ENEVTDKKGKGKQKAEESTLTSDLENLREMLSELEQKTLDLK 326
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 24.6 bits (51), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 32 QKKKAEVEVLLNEEQALRKHHSELGDKCSDLQ 127
QK A E++ NE+QAL +S L ++ + Q
Sbjct: 694 QKLSASFELMSNEKQALELKYSSLKNELINAQ 725
>SPBP23A10.07 |rpa2||DNA-directed RNA polymerase I complex subunit
Rpa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1227
Score = 24.2 bits (50), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 183 RPLALKRSRMRPLMYRISRCRSEHLSP 103
R ++ M P+M R +RC E LSP
Sbjct: 183 RQSEMREVGMIPIMVRSNRCHLEGLSP 209
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 23.8 bits (49), Expect = 3.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -2
Query: 142 VSNLTLQVGAFVSKFRVMFTQGLFLVKKDLDLSLFLLAVAGGCI 11
V ++ ++ + Q L K + D+S+FL V+GG I
Sbjct: 874 VDSINAEISMIADLDHLNIVQYLGFEKTETDISIFLEYVSGGSI 917
>SPAC4H3.03c |||glucan 1,4-alpha-glucosidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 23.8 bits (49), Expect = 3.8
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 252 VTQIRGFDTFYRWRRLTLWIYLIRPLALKRSRMRP 148
+ ++RG + + + ++ LW+ L R L + +R P
Sbjct: 431 IWEVRGQERNFLYSKIMLWVALDRALRIAFTRSLP 465
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 23.4 bits (48), Expect = 5.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 6 IKMQPPATAKRKRLRSRSFLTRNRPCVNITRNLET 110
+K + PA AKRKR+ S F + I LET
Sbjct: 766 VKEKNPAIAKRKRIDSHIFDGDVQRLTRILELLET 800
>SPCC5E4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 101
Score = 23.4 bits (48), Expect = 5.1
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHH 94
+N + R + +KK ++ ++E R+HH
Sbjct: 53 KNPESDRRRQSRKKKSTQIQASDEMKHRRHH 83
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 130 TLQVGAFVSKFRVMFTQGLFLVKKDLDLSL 41
TLQ A +SK++ M Q +F + LSL
Sbjct: 244 TLQYSATISKWKAMIEQIIFQNDQAASLSL 273
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 23.0 bits (47), Expect = 6.7
Identities = 8/29 (27%), Positives = 18/29 (62%)
Frame = +2
Query: 23 RYRQKKKAEVEVLLNEEQALRKHHSELGD 109
R ++++K E + +E +++KH+ GD
Sbjct: 450 RQKEQRKKEYIKKVKKEASIKKHNEATGD 478
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.0 bits (47), Expect = 6.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 65 NEEQALRKHHSELGDKCSDLQREIRYIKGL 154
NEE A S+LG + D +R+ +GL
Sbjct: 466 NEEVAFADSDSDLGGQFDDEDSNLRWKEGL 495
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 38 KKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKG 151
KKA + RKH + LGD D E ++ G
Sbjct: 126 KKATATPTPKSKHVQRKHSARLGDSKVDSALETQFAAG 163
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 23.0 bits (47), Expect = 6.7
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 29 RQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKG 151
+ KK E L ++ L KH+ E+GD+ SDL EI KG
Sbjct: 206 KNKKVFTHEHTLFSKKGLTKHN-EVGDQGSDL--EITGFKG 243
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 23.0 bits (47), Expect = 6.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 42 RLRSRSFLTRNRPCVNITRNLETNAPTCNVRFDTSRVSCETFLK 173
R RSFL+ C I +L + T + +TSR + FL+
Sbjct: 1018 RTLQRSFLSGLSVCTGIIDSLAPISLTIPIIGETSRKELDQFLR 1061
>SPBC21C3.05 |sap62||zinc finger protein Sap62|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHH 94
Q NAA R R +K A + L+++ L K+H
Sbjct: 20 QETNAARRERLRKLALETIDLSKDPYLMKNH 50
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 22.6 bits (46), Expect = 8.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 201 LWIYLIRPLALKRSRMRPLMYRISRC 124
L I L +PL L RS R L+ RC
Sbjct: 825 LSIKLFKPLELTRSFWRTLVSTFCRC 850
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 929,850
Number of Sequences: 5004
Number of extensions: 15291
Number of successful extensions: 56
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 51430850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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