Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O16
(260 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 6e-10
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.003
SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06) 33 0.037
SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.064
SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08) 31 0.11
SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10) 31 0.11
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 30 0.34
SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09) 30 0.34
SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09) 29 0.45
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.0
SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36) 28 1.4
SB_20611| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 27 1.8
SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10) 27 1.8
SB_33443| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.1e-08) 27 1.8
SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 26 4.2
SB_28023| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-37) 26 5.5
SB_52531| Best HMM Match : RVT_1 (HMM E-Value=1e-08) 25 7.3
SB_40707| Best HMM Match : RVT_1 (HMM E-Value=0.17) 25 7.3
SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 25 7.3
SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17) 25 7.3
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 25 7.3
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 25 7.3
SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8) 25 7.3
SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35) 25 7.3
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 25 9.7
SB_40223| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_11632| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_3959| Best HMM Match : RVT_1 (HMM E-Value=6.4e-40) 25 9.7
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 58.8 bits (136), Expect = 6e-10
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKAK 178
QNK+AATRYR KKK E L +E + L K +++L D+ L +EI Y+K LM ++++ K
Sbjct: 454 QNKDAATRYRVKKKDEQSRLFDEAEKLEKENNKLKDEVGSLSKEIEYLKNLMLEVYQTK 512
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 36.7 bits (81), Expect = 0.003
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 5 NKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKAKGL 184
N+ +Y Q+ + VE ++ L+K ++ DLQ EI Y+KG++ + + GL
Sbjct: 279 NREKKKQYVQELEGSVEEYKSKNAVLQKDCEDMKGLVKDLQMEIAYLKGVLANESQLAGL 338
Query: 185 IK*IHSVNRLQ 217
+K I + + ++
Sbjct: 339 LKNIGNTDGVE 349
>SB_37383| Best HMM Match : bZIP_2 (HMM E-Value=2.5e-06)
Length = 222
Score = 33.1 bits (72), Expect = 0.037
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLM 157
+N A+ R R+K++ + + LL E++ K + L + DL+++I+ I+ +
Sbjct: 163 KNNEASKRTREKRRNKEQELLKEKEIKEKENKALRTQVEDLEKQIKDIRSAL 214
>SB_41031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 32.3 bits (70), Expect = 0.064
Identities = 16/52 (30%), Positives = 31/52 (59%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLM 157
+NK AA++ RQK+K V L+ +AL ++ L + + L EI+ ++ ++
Sbjct: 107 RNKVAASKCRQKRKQHVRNLVQVSEALEVQNNTLQSQITKLHDEIKQLEFML 158
>SB_42606| Best HMM Match : Ank (HMM E-Value=3.4e-08)
Length = 551
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 32 QKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMR 160
+K KAE+E L + L + L +CS LQ+++ Y +++
Sbjct: 490 EKIKAELEELQQKTVTLNRKRKSLSSECSQLQKKLHYCDSVLQ 532
>SB_1224| Best HMM Match : bZIP_1 (HMM E-Value=8e-10)
Length = 496
Score = 31.5 bits (68), Expect = 0.11
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRD 163
+NK AA+R R+K++ +E L E L + ++E+ + L+ E ++ L+ +
Sbjct: 296 RNKQAASRCREKRRQRLEELQREATELEEQNAEVERDIATLRVEYNELEALLTE 349
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 29.9 bits (64), Expect = 0.34
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 29 RQKKKAEVEVLLNE-EQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKAK 178
R K + +V+ + ++ LR + L D + QR IKGL+RDL K
Sbjct: 1575 RMKNREDVQAYETKLKETLRDYEGRLSDLTIEKQRNEERIKGLVRDLSTLK 1625
>SB_3656| Best HMM Match : bZIP_2 (HMM E-Value=1e-09)
Length = 241
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLM 157
+N A+ ++RQ +K + + L +E L + + L + L RE+ +K +
Sbjct: 185 RNNQASKKFRQARKGKQQALFAKESELERENYSLKVQVEQLIRELNQLKAAL 236
>SB_58135| Best HMM Match : bZIP_1 (HMM E-Value=1.4e-09)
Length = 275
Score = 29.5 bits (63), Expect = 0.45
Identities = 13/53 (24%), Positives = 31/53 (58%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMR 160
+NK AA + RQ++K ++ L E + + + EL + S+L + + ++ +++
Sbjct: 182 RNKLAAFKCRQRRKEHIQELEIESEGIEDSNKELEREISELHEQRQQLEEMLK 234
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 28.3 bits (60), Expect = 1.0
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQR----EIRYIKGLMRDLF 169
++KNA T +++A VE ++ EE+ L SEL DL R ++RY + L DL
Sbjct: 251 ESKNALT---SRERARVEQMIQEEERLLMEQSELRVDVIDLTRLAQIKLRYQRAL-EDL- 305
Query: 170 KAKGL 184
K K L
Sbjct: 306 KTKNL 310
>SB_962| Best HMM Match : RVT_1 (HMM E-Value=2.5e-36)
Length = 1195
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ GG +F L
Sbjct: 806 FNLFFTQVLLHAVRDLDLGVYIRYRLGGSLFDL 838
>SB_20611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 178 FSFKKVSHETLDVSNLTLQVGAFVSKFRVMFTQGLFLVK 62
F +K HE +S L +++ F S+ R F + L LVK
Sbjct: 19 FLLQKTYHELTVLSELKIEIVQFASRTRQQFVRLLALVK 57
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 71 EQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKAK 178
+Q+L + S G K DL+ E+RY+K + D+ K K
Sbjct: 533 KQSLYESESMKG-KIKDLEDEVRYLKERLEDMAKEK 567
>SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10)
Length = 563
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 11 NAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQ 127
NA ++R++ +VE+ EQA KH + D + Q
Sbjct: 422 NALPKHRRRPLTQVEIAQRREQARLKHAERMEDALQNAQ 460
>SB_33443| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.1e-08)
Length = 415
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 178 RSNQINPQRQPPPAIESVKTAYL 246
R++Q+NP++ PPP + K +L
Sbjct: 335 RAHQLNPEKIPPPPLRVAKAEHL 357
>SB_17789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIR 139
+NK +A R+KKK VE L ++ ++ L D+ S L I+
Sbjct: 171 KNKLSAQESRRKKKEYVETLEKRLESFILENNTLRDRVSSLDNTIK 216
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQRE 133
+++N + RQK ++E L E ++ +K+ + L DL+ E
Sbjct: 1114 KHENLMSELRQKNSKQIEELTIELESTKKNKNSLEKSKKDLENE 1157
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 68 EEQALRKHHSELGDKCSDLQREI 136
E +AL+K H EL +K DL++ +
Sbjct: 540 ELEALKKEHQELKEKSEDLEKNL 562
>SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 89 HHSELG-DKCSDLQREIRYIKGLMRDLFK 172
H S LG +KC R I Y G+ RD+++
Sbjct: 756 HESHLGIEKCKARARAIIYCPGMSRDIYE 784
>SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 8 KNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYI-KGLMRDLFKA 175
K+ R+K++ +V + E Q R SE + +RE+ +I K + RD F++
Sbjct: 701 KSKCMSAREKREKKVYDIEPEHQRSRVGLSECPSNAASTRREVTFIAKSITRDNFRS 757
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/54 (20%), Positives = 25/54 (46%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRD 163
+ K ++ + ++++ N+ L D C +LQ E+RY + L ++
Sbjct: 617 EEKRNLEEMTREYEQQLKLAQNQNGTLEMAIKAKSDHCMELQEELRYFRNLYQE 670
>SB_28023| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-37)
Length = 347
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 152 LMRDLFKAKGLIK*IHSVNRLQR*KVSKPRICV 250
L R L K+KG++ H++ + Q K++K C+
Sbjct: 214 LRRQLKKSKGMMANSHTLRQKQNRKIAKLAFCI 246
>SB_52531| Best HMM Match : RVT_1 (HMM E-Value=1e-08)
Length = 309
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 ETLDVSNLTLQVGAFVSK-FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
E+ +SN Q F + FTQ L +DLDL +++ G +F L
Sbjct: 103 ESFSISNGVKQACVLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 154
>SB_40707| Best HMM Match : RVT_1 (HMM E-Value=0.17)
Length = 208
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 ETLDVSNLTLQVGAFVSK-FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
E+ +SN Q F + FTQ L +DLDL +++ G +F L
Sbjct: 103 ESFSISNGVKQACVLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 154
>SB_36818| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 629
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 ETLDVSNLTLQVGAFVSK-FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
E+ +SN Q F + FTQ L +DLDL +++ G +F L
Sbjct: 291 ESFSISNGVKQACVLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 342
>SB_35620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 15 QPPATAKRKRLRSRSFLTRNRPCVN 89
QPP KRKR R S N+ CV+
Sbjct: 42 QPPRGRKRKRKRPTSVSFTNQGCVH 66
>SB_34153| Best HMM Match : DUF972 (HMM E-Value=0.17)
Length = 473
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/64 (21%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIR-YIKGLMRDLFKAK 178
Q A + +K+K+ ++ + E Q + H E ++ + R++R ++ L + L + K
Sbjct: 393 QQYEEAAKIAEKRKSMLDQMAIERQEIETAHREAVERIQEEHRKLRKEVEDLHQKLNENK 452
Query: 179 GLIK 190
L++
Sbjct: 453 SLLQ 456
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 80 LRKHHSELGDKCSDLQREIR 139
LRKH +EL + DLQ+ IR
Sbjct: 561 LRKHKTELEKEIEDLQKAIR 580
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHH-SELGDKCSDLQREI 136
+NK + +K+ E+EVL E L+KH L ++ S ++ E+
Sbjct: 650 KNKRYFKNHLNEKEKEIEVLKVEIMKLKKHQFDNLVEEVSSVRAEL 695
>SB_43443| Best HMM Match : Phage_fiber (HMM E-Value=3.8)
Length = 266
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 154 ETLDVSNLTLQVGAFVSK--FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
E+ VSN Q G ++ F + FTQ L +DLDL +++ G +F L
Sbjct: 26 ESFSVSNGVKQ-GCVLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 77
>SB_8130| Best HMM Match : RVT_1 (HMM E-Value=8e-35)
Length = 869
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 ETLDVSNLTLQVGAFVSK-FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
E+ +SN Q F + FTQ L +DLDL +++ G +F L
Sbjct: 551 ESFSISNGVKQACVLAPVLFNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 602
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 77 ALRKHHSELGDKCSDLQREIRYIKGLMRD 163
+L+K +L +C D + EIR ++ ++ D
Sbjct: 834 SLQKEQKKLQKRCEDREDEIRQLRQIIED 862
>SB_40223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ G +F L
Sbjct: 214 FNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 246
>SB_24118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 23 RYRQKKKAEVEVLLNEEQALRKHHSEL 103
R QK++ + LL ++QAL KH EL
Sbjct: 252 RELQKEQIKGNRLLKQKQALSKHQGEL 278
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +2
Query: 14 AATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQREIRYIKGLMRDLFKAKG 181
+AT+ +K E E + +E K H L +K ++E++ KG+ ++ +G
Sbjct: 284 SATKAAGRKLIEEEQVSDEFSGRAKSHRALFEKRIAEEKEVKTSKGVEEEIAPKRG 339
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 2 QNKNAATRYRQKKKAEVEVLLNEEQALRKHHSELGDKCSDLQRE 133
+N+ T+ +KK+ + + EE R+ HS+ +K S+ +RE
Sbjct: 177 KNETGETKEERKKRHKDKKKKREESKERRRHSDKAEK-SERKRE 219
>SB_11632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ G +F L
Sbjct: 84 FNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 116
>SB_57033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ G +F L
Sbjct: 271 FNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 303
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ G +F L
Sbjct: 3036 FNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 3068
>SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 18 PPATAKRKRLRSRS---FLTRNRPCVNITRNLETNAPT 122
PP++ R R RSRS +++ P VN+ + +P+
Sbjct: 568 PPSSVSRHRSRSRSRLEIVSKKSPAVNVLCSSRIESPS 605
>SB_3959| Best HMM Match : RVT_1 (HMM E-Value=6.4e-40)
Length = 380
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 100 FRVMFTQGLFLVKKDLDLSLFLLAVAGGCIFIL 2
F + FTQ L +DLDL +++ G +F L
Sbjct: 214 FNLFFTQVLLHAVRDLDLGVYIRYRLDGSLFDL 246
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,303,118
Number of Sequences: 59808
Number of extensions: 129891
Number of successful extensions: 512
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 16,821,457
effective HSP length: 63
effective length of database: 13,053,553
effective search space used: 300231719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -