Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O15
         (333 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5IKH8 Cluster: Radical SAM domain protein; n=2; Thermo...    34   0.55 
UniRef50_A1RU61 Cluster: Putative uncharacterized protein; n=1; ...    32   2.2  
UniRef50_P32047 Cluster: Protein MLF3; n=2; Saccharomyces cerevi...    32   2.2  
UniRef50_Q6CNW6 Cluster: Similar to sgd|S0005548 Saccharomyces c...    31   6.7  
UniRef50_Q1WV98 Cluster: Aminotransferase class I and II; n=1; L...    30   8.9  
UniRef50_Q9U3F4 Cluster: Putative uncharacterized protein zyx-1;...    30   8.9  

>UniRef50_A5IKH8 Cluster: Radical SAM domain protein; n=2;
           Thermotoga|Rep: Radical SAM domain protein - Thermotoga
           petrophila RKU-1
          Length = 283

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 210 TIYHM-GE--IYNCSLSASSAHYATATVAILSRVVWTTVPEDLV 332
           T Y M GE  +YNC   A S   +T+    LSRV+W  +PEDL+
Sbjct: 23  TAYFMLGERCVYNCLYCAQSRS-STSPSHFLSRVIWKEIPEDLL 65


>UniRef50_A1RU61 Cluster: Putative uncharacterized protein; n=1;
           Pyrobaculum islandicum DSM 4184|Rep: Putative
           uncharacterized protein - Pyrobaculum islandicum (strain
           DSM 4184 / JCM 9189)
          Length = 97

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNNYK 232
           P+ P P +  PET WLP ++ + RK P +  ++
Sbjct: 43  PSGPMPDNPAPETVWLPMKAWTMRKPPGITAWR 75


>UniRef50_P32047 Cluster: Protein MLF3; n=2; Saccharomyces
           cerevisiae|Rep: Protein MLF3 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 452

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 1   RTEGSATQTKSSGPSSILPETKWLPSRSHSARKTPTVNNI 120
           RT  +   +  S P+S  P+ K   S SHSA   PT+NNI
Sbjct: 168 RTNSATLPSSESSPAS--PDLKLSRSHSHSAATRPTLNNI 205


>UniRef50_Q6CNW6 Cluster: Similar to sgd|S0005548 Saccharomyces
           cerevisiae YOR022c; n=1; Kluyveromyces lactis|Rep:
           Similar to sgd|S0005548 Saccharomyces cerevisiae YOR022c
           - Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 629

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -1

Query: 327 NPPGPSSILPETKWLPSRSHSARKTPTVNNY--KFHPCD 217
           +P G   ++  TK   S S + ++TP  NN+   FHPCD
Sbjct: 461 SPIGVFKLIQRTKIGESDSSTRQQTPACNNFYNLFHPCD 499


>UniRef50_Q1WV98 Cluster: Aminotransferase class I and II; n=1;
           Lactobacillus salivarius subsp. salivarius UCC118|Rep:
           Aminotransferase class I and II - Lactobacillus
           salivarius subsp. salivarius (strain UCC118)
          Length = 394

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 192 Y*LY*STIYHMGEIYNCSLSASSAHYATATVAILSRVVWTTVPEDLV 332
           Y  Y S      E+YNC+L  S   ++   VA LS ++   + ED V
Sbjct: 58  YEYYASVAKWYKEMYNCTLDISWMSFSQGVVATLSAIITNLMSEDSV 104


>UniRef50_Q9U3F4 Cluster: Putative uncharacterized protein zyx-1;
           n=3; Caenorhabditis|Rep: Putative uncharacterized
           protein zyx-1 - Caenorhabditis elegans
          Length = 603

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNNY 235
           P PP P  +LP  + LPSR       P  NN+
Sbjct: 4   PPPPPPPPLLPSGEILPSRKWKTEDAPRRNNH 35


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,932,869
Number of Sequences: 1657284
Number of extensions: 4683635
Number of successful extensions: 12956
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12954
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)