Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O15
         (333 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110818-1|AAI10819.1|  646|Homo sapiens CHD7 protein protein.         29   2.6  
BC080627-1|AAH80627.1|  628|Homo sapiens CHD7 protein protein.         29   2.6  
BC068000-1|AAH68000.1|  594|Homo sapiens CHD7 protein protein.         29   2.6  
BC053890-1|AAH53890.1|  594|Homo sapiens CHD7 protein protein.         29   2.6  
BC014681-1|AAH14681.1|  637|Homo sapiens Unknown (protein for IM...    29   2.6  
AK123158-1|BAC85544.1|  572|Homo sapiens protein ( Homo sapiens ...    29   2.6  
BC106004-1|AAI06005.1|  514|Homo sapiens pleiotropic regulator 1...    28   7.9  
BC020786-1|AAH20786.1|  505|Homo sapiens PLRG1 protein protein.        28   7.9  
AF044333-1|AAD09407.1|  514|Homo sapiens pleiotropic regulator 1...    28   7.9  

>BC110818-1|AAI10819.1|  646|Homo sapiens CHD7 protein protein.
          Length = 646

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 277 PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 306


>BC080627-1|AAH80627.1|  628|Homo sapiens CHD7 protein protein.
          Length = 628

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 301 PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 330


>BC068000-1|AAH68000.1|  594|Homo sapiens CHD7 protein protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 271 PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 300


>BC053890-1|AAH53890.1|  594|Homo sapiens CHD7 protein protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 271 PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 300


>BC014681-1|AAH14681.1|  637|Homo sapiens Unknown (protein for
           IMAGE:3866722) protein.
          Length = 637

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 271 PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 300


>AK123158-1|BAC85544.1|  572|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41163 fis, clone BRACE2039734. ).
          Length = 572

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 330 PNPPGPSSILPETKWLPSRSHSARKTPTVNN 238
           PNPP   ++ P+T    SRS +   +PT+NN
Sbjct: 33  PNPPQQGAVRPQTLNFSSRSQTV-PSPTINN 62


>BC106004-1|AAI06005.1|  514|Homo sapiens pleiotropic regulator 1
           (PRL1 homolog, Arabidopsis) protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 333 RPNPPGPSSILPETKWLPSRSHSARKTPTVNNYKFHP 223
           RP P   +SI+ ET    + +  A+K PT+   ++HP
Sbjct: 156 RPQPTAMNSIVMETGNTKNSALMAKKAPTMPKPQWHP 192


>BC020786-1|AAH20786.1|  505|Homo sapiens PLRG1 protein protein.
          Length = 505

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 333 RPNPPGPSSILPETKWLPSRSHSARKTPTVNNYKFHP 223
           RP P   +SI+ ET    + +  A+K PT+   ++HP
Sbjct: 147 RPQPTAMNSIVMETGNTKNSALMAKKAPTMPKPQWHP 183


>AF044333-1|AAD09407.1|  514|Homo sapiens pleiotropic regulator 1
           protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 333 RPNPPGPSSILPETKWLPSRSHSARKTPTVNNYKFHP 223
           RP P   +SI+ ET    + +  A+K PT+   ++HP
Sbjct: 156 RPQPTAMNSIVMETGNTKNSALMAKKAPTMPKPQWHP 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,705,284
Number of Sequences: 237096
Number of extensions: 773684
Number of successful extensions: 1843
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1736741460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)