Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O14
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   3.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   7.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 PGTYYHIPDRRRSNCRCN 336
           PGT +  PDR++   +CN
Sbjct: 651 PGTRFFYPDRKQVILKCN 668


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 283 PGTYYHIPDRRRSNCRCN 336
           PGT +  PDR++   +CN
Sbjct: 741 PGTRFFYPDRKQVILKCN 758


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 56  PVWLDTVQLNPT 21
           P W D V LNPT
Sbjct: 338 PAWCDRVLLNPT 349


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 148 EIHRYGQGRVDVGTTNGFEST 86
           E +RY  GRV + T  G E T
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKT 387


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 148 EIHRYGQGRVDVGTTNGFEST 86
           E +RY  GRV + T  G E T
Sbjct: 367 ETNRYSSGRVLMRTVRGKEKT 387


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 98  SIGGTDINTALTVAVDL 148
           S+GG  + T LTV   L
Sbjct: 292 SVGGESVETVLTVTAPL 308


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 290 PIIIFLTDGDPTVGVTSTKTIIKHLTEK 373
           P I+   + D   GVT+    I H T K
Sbjct: 105 PDIVLYNNADGEYGVTTMTKAILHYTGK 132


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 368 EKNKGENKATM 400
           EKN G NK TM
Sbjct: 145 EKNAGNNKITM 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,387
Number of Sequences: 438
Number of extensions: 3477
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)