Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O12
         (312 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    30   0.39 
U53155-4|AAC48265.1|  619|Caenorhabditis elegans Hypothetical pr...    29   0.90 
AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical ...    29   0.90 
Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical pr...    27   2.1  
AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical ...    27   2.8  
Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical p...    26   6.4  
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr...    26   6.4  
AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfa...    26   6.4  
Z98261-1|CAB10931.1|  920|Caenorhabditis elegans Hypothetical pr...    25   8.4  
Z81118-4|CAB03327.1|  309|Caenorhabditis elegans Hypothetical pr...    25   8.4  
Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical pr...    25   8.4  
Z71266-11|CAA95847.1|  920|Caenorhabditis elegans Hypothetical p...    25   8.4  
Z71258-16|CAA95786.1|  920|Caenorhabditis elegans Hypothetical p...    25   8.4  
U64608-3|AAB04593.2|  349|Caenorhabditis elegans Serpentine rece...    25   8.4  
AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain (...    25   8.4  
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ...    25   8.4  

>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 29.9 bits (64), Expect = 0.39
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = +3

Query: 129  SLFQDVDQVNVDDEYYKIGKDYDVEANIDXY----TNKKAVEEFLKLYR--IGYLPKY 284
            S+  DV ++++DD+Y+ +G  +D +   D        + AV  F  L+R    +LP Y
Sbjct: 2542 SMEDDVQRLDLDDDYFDMGGPFDAQRMDDMIFPPSFGRPAVTSFADLFRDDFDFLPPY 2599


>U53155-4|AAC48265.1|  619|Caenorhabditis elegans Hypothetical
           protein ZC513.3 protein.
          Length = 619

 Score = 28.7 bits (61), Expect = 0.90
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 297 WRTHSTWEDN-RFCTISRILQQLSYWCSXRC 208
           WRT +  E + +F  +SRIL+Q + W S  C
Sbjct: 542 WRTFAIREKSEKFPNVSRILRQKTSWVSKNC 572


>AF016673-5|AAB66123.1|  684|Caenorhabditis elegans Hypothetical
           protein T06D4.4 protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 0.90
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = +3

Query: 21  AGLIALVQSSVVSPKTYHFKTKDVDAVFVERQKKVLS---LFQDVDQVNVD 164
           +GL+  +QS ++   +  F  K++DA+  +  K+ L+   +F  +D V  D
Sbjct: 297 SGLVRRIQSGILITNSSSFFGKNLDAIIQQTHKRTLANYLIFHFIDAVTFD 347


>Z35663-8|CAA84728.1|  249|Caenorhabditis elegans Hypothetical
           protein T04A8.9 protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 120 KVLSLFQDVDQVNVDDEYYKIGKDYDVEAN 209
           KVL L Q   Q ++   YYK+ K +  + N
Sbjct: 27  KVLGLAQSASQKDIKSAYYKLSKQHHPDTN 56


>AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical
          protein F40G9.12 protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 17 SSGAHCPRAIQCGVT 61
          +SG HCPR + CG T
Sbjct: 28 TSGDHCPRVLSCGHT 42


>Z81479-10|CAB03945.2|  324|Caenorhabditis elegans Hypothetical
           protein C34F6.4 protein.
          Length = 324

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +3

Query: 72  HFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKD-YDVEANIDXYTNKKAVEEF 248
           HF + D +   +   KK +        +   DE YK+ ++ YD   N+     KKA    
Sbjct: 244 HFDSLDANRAHLRYTKKKIPPNDQTLSMIRRDEVYKMEREFYDFINNLFDAVFKKATNGI 303

Query: 249 LKLYRIGYLPKYYEF 293
            K   +  LP  Y F
Sbjct: 304 SKADDLVKLPLQYHF 318


>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
           protein F40H6.5 protein.
          Length = 1288

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +1

Query: 196 TLKPTSX---TTPIRKLLKNS*NCTESV 270
           TL PT     T PI K+LKNS N T+ V
Sbjct: 139 TLSPTQYVFETNPIWKILKNSKNGTQGV 166


>AY552606-1|AAS89253.1|  324|Caenorhabditis elegans heparan sulfate
           2O-sulfotransferase protein.
          Length = 324

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = +3

Query: 72  HFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKD-YDVEANIDXYTNKKAVEEF 248
           HF + D +   +   KK +        +   DE YK+ ++ YD   N+     KKA    
Sbjct: 244 HFDSLDANRAHLRYTKKKIPPNDQTLSMIRRDEVYKMEREFYDFINNLFDAVFKKATNGI 303

Query: 249 LKLYRIGYLPKYYEF 293
            K   +  LP  Y F
Sbjct: 304 SKADDLVKLPLQYHF 318


>Z98261-1|CAB10931.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 75  FKTKDVDAVFVERQKKVLSLFQDVDQVNVD 164
           FK  D DA   E+ KK+   F  +D V+++
Sbjct: 95  FKVPDADADEEEKIKKIKEAFDSLDDVSLE 124


>Z81118-4|CAB03327.1|  309|Caenorhabditis elegans Hypothetical
           protein T10G3.4 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 105 VERQKKVLSLFQDVDQVNVDDEYYKIGKDYDV 200
           +ER+K  +    D DQ  V   YYK+GK + V
Sbjct: 278 MERRKPTVRQSIDPDQNKVLKVYYKLGKWFSV 309


>Z78541-1|CAB01740.1|  452|Caenorhabditis elegans Hypothetical
           protein F19D8.1 protein.
          Length = 452

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 88  MSTQCLWSARKRFYPF 135
           MST CL S R  FYP+
Sbjct: 1   MSTMCLRSTRNIFYPY 16


>Z71266-11|CAA95847.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 75  FKTKDVDAVFVERQKKVLSLFQDVDQVNVD 164
           FK  D DA   E+ KK+   F  +D V+++
Sbjct: 95  FKVPDADADEEEKIKKIKEAFDSLDDVSLE 124


>Z71258-16|CAA95786.1|  920|Caenorhabditis elegans Hypothetical
           protein C01H6.9 protein.
          Length = 920

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 75  FKTKDVDAVFVERQKKVLSLFQDVDQVNVD 164
           FK  D DA   E+ KK+   F  +D V+++
Sbjct: 95  FKVPDADADEEEKIKKIKEAFDSLDDVSLE 124


>U64608-3|AAB04593.2|  349|Caenorhabditis elegans Serpentine
           receptor, class v protein7 protein.
          Length = 349

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -2

Query: 293 ELIVLGKITDSVQFQEFFNSFLIGVVIDV 207
           E+++L  + ++V    F+  F IG++IDV
Sbjct: 36  EILILVTLRNTVYKGMFYQIFTIGIIIDV 64


>AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 19 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 126 LSLFQDVDQVNVDDEYYKIGKDYDVEANID 215
           L++  D  Q ++   Y+K+ K+Y  + N D
Sbjct: 18  LNVRPDASQADIKKSYFKLAKEYHPDKNPD 47


>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
           protein Y55F3BR.2 protein.
          Length = 1594

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +2

Query: 32  CPRAIQCGVTENVSLQDKRC---RRSVCG-APEKGFIP 133
           CP    C V E   +  +RC   + S+C   P+ G +P
Sbjct: 775 CPVGYDCSVVEANGVMQRRCCPSKVSICSKPPQMGMLP 812


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,626,517
Number of Sequences: 27780
Number of extensions: 119858
Number of successful extensions: 363
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)