Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O11
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 33 0.051
08_02_0070 - 11897089-11898150,11898389-11898644,11898755-118990... 31 0.27
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90... 30 0.48
05_01_0120 - 828834-831143 29 1.1
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 28 1.5
02_05_0713 + 31159574-31160764 28 1.9
07_03_1681 + 28624899-28625075,28625224-28625400,28625508-286256... 27 2.6
04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179 27 2.6
11_06_0664 + 26048249-26048764,26048916-26050142 27 3.4
07_03_1288 + 25518522-25518797 27 4.5
04_01_0212 - 2654691-2656976 27 4.5
12_01_1110 + 11756814-11757485,11757566-11757644,11757705-117579... 26 5.9
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 26 5.9
03_02_0874 + 12017069-12018051,12018137-12018316,12018421-120186... 26 5.9
12_01_1052 + 10821964-10822064,10822434-10822607,10823086-108233... 26 7.8
11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747 26 7.8
06_03_0197 + 17794418-17794771,17795040-17795549 26 7.8
03_06_0191 - 32228642-32228949,32229028-32230567 26 7.8
03_05_0793 + 27755704-27756386,27756473-27757274,27757379-277576... 26 7.8
03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522... 26 7.8
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 33.1 bits (72), Expect = 0.051
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 84 NEFGIDFSKGDKPVVAGRDVDGNKYVMKSEFSIENLVAFAKDLIGGKLKPF 236
N FGI + G + D + + E S+EN+ FA+D + KL PF
Sbjct: 361 NYFGITGQETTVLAYTGNE-DARNFFLDGEISVENIKRFAEDFLEEKLTPF 410
>08_02_0070 -
11897089-11898150,11898389-11898644,11898755-11899059,
11899149-11899550
Length = 674
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 250 QYTCSNGFSFPPMRSFAKATRFSMLNSDFMTYLFPSTSRPATTGLSPLEKSIPNSF---- 83
++ C+NG F +RS A + +N Y PS+ + TT L ++S+ +
Sbjct: 174 KFLCANGIPFNILRSPQFAEMVTAINKAPSGYKGPSSEKARTTLLDACKRSVEHDLAIVK 233
Query: 82 NSWTKSSLSLMAKFTLDI 29
++W +S+++ DI
Sbjct: 234 STWCTQGVSIVSDGWTDI 251
>08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-901831,
901912-902016,902245-902391,903273-903354,903445-903786,
903873-904177,904259-904435,904799-904852,905171-905254,
905855-905968,906048-906321,907552-907926,908003-908267,
908352-908538,908615-909052,909895-909966,910037-910630,
911471-911623,911700-911828,912326-912657,912705-912840,
913046-913491,913580-915087,915169-915431,915622-915738,
915844-916014,916743-916845,916930-916988,918360-918461,
918560-918649,918727-918877,919745-919830,919926-920102,
920915-920978,921859-922008,923132-923211,923311-923376,
924540-924747,925502-925575,925761-925848,926140-926312,
926541-926609,926698-926741,927074-927167,927290-927366,
927475-927552,927992-928085
Length = 3314
Score = 29.9 bits (64), Expect = 0.48
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 295 NIYYFKHSPFSSHL*QYTCSNGFSFPPMRSFAKATRFSM--LNSDFMTYLF-PSTSRPAT 125
++ +++ F++ + Q ++G S R+ A T+ + N + Y+F PS PAT
Sbjct: 2306 SVSFWRLKSFANKIPQLDFADGGSSYSNRTAANNTKDAPKECNKEAKAYMFAPSGHTPAT 2365
Query: 124 TGLSPLEKSIPNSFNSWTKSSLS 56
L L S+PNS T+ S
Sbjct: 2366 ELLVKLNASVPNSGTETTRRDWS 2388
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = -1
Query: 250 QYTCSNGFSFPPMRSFAKATRFSMLNSDFMT---YLFPSTSRPATTGLSPLEKSIPNSFN 80
Q+ + + PP S + + S ++S + + L PSTS P + GLSP + ++
Sbjct: 491 QHLAAEASTSPPFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLV 550
Query: 79 SWTKSSL 59
++S L
Sbjct: 551 PSSRSPL 557
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 39 VNFAISDKDDFVHELNEFGIDFSKGDKPVVAGRDVDGNKYVMKSEFSIENLVAFAKDLIG 218
+ F I D + FG+ + P++ +D + K+ +K+ + +V++ K+
Sbjct: 310 IKFLIGDIEASQGAFQYFGL--REDQVPLIIIQDGESKKF-LKAHVEPDQIVSWLKEYFD 366
Query: 219 GKLKPFEQ 242
GKL PF +
Sbjct: 367 GKLSPFRK 374
>02_05_0713 + 31159574-31160764
Length = 396
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 180 IENLVAFA-KDLIGGKLKPFEQVYCHRCELKGE 275
I+ L FA +D++GG +PF+ C CE GE
Sbjct: 131 IDALPVFAYRDIVGGDKEPFDCAVC-LCEFDGE 162
>07_03_1681 +
28624899-28625075,28625224-28625400,28625508-28625673,
28625761-28626152
Length = 303
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = -1
Query: 178 LNSDFMTYLFPSTSRPATTG---LSPLEKSIPNSFNS 77
++S F T L + RP +G L+PL+ + PN+F+S
Sbjct: 196 IDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDS 232
>04_01_0232 + 2943241-2943604,2944191-2944782,2944993-2945179
Length = 380
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/24 (50%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 74 DEIILVAYGEVHV--GHFLRDLEY 9
D+I+LVA+G +HV G F+ +L+Y
Sbjct: 27 DQILLVAHGNLHVTKGAFIDNLQY 50
>11_06_0664 + 26048249-26048764,26048916-26050142
Length = 580
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/68 (27%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +3
Query: 84 NEFGIDFSKGDKPVVA---GRDVDGNKYVMKSEFSIENLVAFAKDLIGGKLKPFEQVYCH 254
N F D G PV GR DG + +K NL ++ +L +CH
Sbjct: 187 NNFATDRQIGTNPVARVYKGRLADGREVAVKQLVGNSNLSLAVEEEFQAELSLLSIRHCH 246
Query: 255 RCELKGEC 278
L G C
Sbjct: 247 IVRLLGWC 254
>07_03_1288 + 25518522-25518797
Length = 91
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 138 DVDGNKYVMKSEFSIENLVAFAKDLIGGKL 227
D D + +V +SE IENLVAFA+ +G K+
Sbjct: 61 DRDNSGFVDESE--IENLVAFAQKTLGMKV 88
>04_01_0212 - 2654691-2656976
Length = 761
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = -3
Query: 74 DEIILVAYGEVHV--GHFLRDLEY 9
D+I+LVA+G +H+ G F+ +L+Y
Sbjct: 192 DQIMLVAHGNLHITKGAFIDNLQY 215
>12_01_1110 +
11756814-11757485,11757566-11757644,11757705-11757991,
11758072-11758131,11758311-11758976
Length = 587
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1
Query: 187 FSMLNSDFMTYLFPSTSRPATTGLSPLEKS 98
F S +MTYLFP + P TT SP KS
Sbjct: 206 FHQSASMYMTYLFPD-AIPQTTESSPPRKS 234
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 224 FPTDEVFRESD--QVFDAEFRLHDVFVPVDVTSGHDGFVAFREIDTELVQLV 75
FP D FRE D F +HDV +P GFV F + E V+L+
Sbjct: 367 FPADSTFREEDVSNYFSIYGPVHDVRIPYQ-QKRMFGFVTF--VYPETVKLI 415
>03_02_0874 +
12017069-12018051,12018137-12018316,12018421-12018600,
12018718-12018797,12018999-12019259,12019360-12019474,
12019631-12019855,12020840-12020849
Length = 677
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 224 FPTDEVFRESD--QVFDAEFRLHDVFVPVDVTSGHDGFVAFREIDTELVQLV 75
FP D FRE D F +HDV +P GFV F + E V+L+
Sbjct: 372 FPADSTFREEDVSNYFSIYGPVHDVRIPYQ-QKRMFGFVTF--VYPETVKLI 420
>12_01_1052 +
10821964-10822064,10822434-10822607,10823086-10823346,
10829833-10831798,10832114-10832515
Length = 967
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 57 DKDDFVHELNEFGIDFSKGDKPVVAGRDVDGNK 155
D++ F+ L + +D SKGD + G D+D K
Sbjct: 679 DRERFIGSLMDMFLDNSKGDFGNLPGEDLDLKK 711
>11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747
Length = 471
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 203 RESDQVFDAEFRLHDVFVPVDVTSGHDGFVAFREIDTELVQLVDEIILVAYG 48
R SD V +AE RL ++ + DG +RE+ +V I+ G
Sbjct: 224 RTSDSVEEAELRLEEIKHAAEAPPQEDGGGVWRELLLRPTAMVRRILTCVVG 275
>06_03_0197 + 17794418-17794771,17795040-17795549
Length = 287
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 51 ISDKDDFVHELNEFGIDFSK 110
+SD DD HELN FS+
Sbjct: 222 VSDSDDHEHELNNKAFSFSR 241
>03_06_0191 - 32228642-32228949,32229028-32230567
Length = 615
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 72 VHELNEFGIDFSKGDKPVVAGRDVDGNKYVMKSEFSIENLVAFAKDLIGGKLKPFEQVYC 251
+ E E GD P+ DV SE ++ V F K +IG + P +
Sbjct: 272 IGEAKEIAEAIVLGDFPI--NDDVLNALICSVSEIDVDAAVMFCKFMIGKERFPSSDMLI 329
Query: 252 HRCE 263
H CE
Sbjct: 330 HLCE 333
>03_05_0793 +
27755704-27756386,27756473-27757274,27757379-27757634,
27758355-27758566,27760494-27760709
Length = 722
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 117 KPVVAGRDVDGNKYVMKSEFSIENLVAFAKDL 212
KP+V GR VDG + ++ +VA D+
Sbjct: 92 KPMVLGRPVDGKTAARRRRSALSRIVADTSDV 123
>03_05_0554 -
25551220-25551310,25551562-25551695,25552115-25552221,
25552359-25552437,25552524-25552613,25552790-25553044,
25553388-25553537,25553677-25553976
Length = 401
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -1
Query: 283 FKHSPFSSHL*QYTCSNGFSFPPMRSFAKATRFSMLNSDFMTYLFPSTSRPATTGLSPLE 104
+K F+SH+ P M F KAT + F+ P+T L+P+
Sbjct: 257 YKSMKFTSHVIHEALRLANIAPVM--FRKATEDVHIKGFFIPKGSKIMICPSTVHLNPMI 314
Query: 103 KSIPNSFNSW 74
PN FN W
Sbjct: 315 YKDPNIFNPW 324
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,939,491
Number of Sequences: 37544
Number of extensions: 114476
Number of successful extensions: 423
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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