Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O10
         (580 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.3  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   5.7  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 524 PQPRPS*FRPLPEKSGRTR 580
           P P P+ F   P+  G+TR
Sbjct: 136 PNPEPADFADAPDAIGKTR 154


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 524 PQPRPS*FRPLPEKSGRTR 580
           P P P+ F   P+  G+TR
Sbjct: 136 PNPEPADFADAPDAIGKTR 154


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 18  LLKSGSAERKHKFCELKRKFYCIECSQSDQNVQS 119
           +L+    ER   F E KR    +    S+QN+QS
Sbjct: 403 ILEKAPNERTLIFVETKRNADFLATFLSEQNIQS 436


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 500 IYLPWE*LWPRFILNLSVFKMFMSLGGDNVGSGSGLQV 387
           +YL     WPRF+ + S  ++ M+  G   G    L V
Sbjct: 118 LYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNV 155


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 500 IYLPWE*LWPRFILNLSVFKMFMSLGGDNVGSGSGLQV 387
           +YL     WPRF+ + S  ++ M+  G   G    L V
Sbjct: 118 LYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNV 155


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 500 IYLPWE*LWPRFILNLSVFKMFMSLGGDNVGSGSGLQV 387
           +YL     WPRF+ + S  ++ M+  G   G    L V
Sbjct: 118 LYLKLAMKWPRFMKDWSCVEVMMASYGWPAGLNRRLNV 155


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 193 KKAALKRARESPPLTGLVTPQPSDSEGEEEF 285
           K+   K   +SP  T  V+P+  DS  +  F
Sbjct: 105 KRKTWKVEEDSPSPTSSVSPEVKDSSRDRPF 135


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 382 DGTCSPEPLPTL 417
           DGT SPEP P +
Sbjct: 75  DGTTSPEPDPEI 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,643
Number of Sequences: 336
Number of extensions: 1590
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)