Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O10
         (580 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0449 - 34013973-34014056,34014595-34014630,34014729-340148...    28   6.2  
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741...    27   8.2  

>03_06_0449 -
           34013973-34014056,34014595-34014630,34014729-34014816,
           34015034-34015143,34015611-34015715,34015812-34015903,
           34016145-34016232,34016407-34016526,34016603-34016721,
           34017253-34018126
          Length = 571

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 379 KDGTCSPEPLPTLSPPNDMNILKTLKFK 462
           K   CSPE +P  SPP +       KF+
Sbjct: 289 KQDVCSPEKIPEKSPPEETETSINAKFR 316


>05_06_0144 -
           25973635-25973801,25973878-25973947,25974049-25974190,
           25974647-25974827,25975248-25975443
          Length = 251

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +1

Query: 394 SPEPLPTLSPPNDM--NILKTLKFKMNRG 474
           SP  +P +  P D+  N+ ++L+F++NRG
Sbjct: 127 SPPNIPEVKIPEDLAVNVARSLRFEINRG 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,093,542
Number of Sequences: 37544
Number of extensions: 205862
Number of successful extensions: 608
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)