Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O10
         (580 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81495-11|CAN99657.1|  339|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z81495-10|CAD57692.1|  480|Caenorhabditis elegans Hypothetical p...    28   5.5  
Z81495-9|CAB04064.1|  389|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL032644-11|CAN99705.1|  339|Caenorhabditis elegans Hypothetical...    28   5.5  
AL032644-10|CAD57710.1|  480|Caenorhabditis elegans Hypothetical...    28   5.5  
AL032644-9|CAA21673.1|  389|Caenorhabditis elegans Hypothetical ...    28   5.5  

>Z81495-11|CAN99657.1|  339|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1c protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 110 GSTFSKFETCAIDSKYYCTECMKSGGKV 137


>Z81495-10|CAD57692.1|  480|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 251 GSTFSKFETCAIDSKYYCTECMKSGGKV 278


>Z81495-9|CAB04064.1|  389|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1a protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 160 GSTFSKFETCAIDSKYYCTECMKSGGKV 187


>Z46812-5|CAA86847.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 169 ENKIELPLKKAALKRARESPPLTGLVTPQPSDSEGEEEFNKRS 297
           ++KI L +++ ALK+ARES   T    P+   S    +  K+S
Sbjct: 134 KSKITLRMREEALKKARESCLRTESSPPEREASRRRRDLEKKS 176


>Z37093-7|CAA85468.2|  775|Caenorhabditis elegans Hypothetical
           protein ZK669.1a protein.
          Length = 775

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 169 ENKIELPLKKAALKRARESPPLTGLVTPQPSDSEGEEEFNKRS 297
           ++KI L +++ ALK+ARES   T    P+   S    +  K+S
Sbjct: 134 KSKITLRMREEALKKARESCLRTESSPPEREASRRRRDLEKKS 176


>AL032644-11|CAN99705.1|  339|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1c protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 110 GSTFSKFETCAIDSKYYCTECMKSGGKV 137


>AL032644-10|CAD57710.1|  480|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 251 GSTFSKFETCAIDSKYYCTECMKSGGKV 278


>AL032644-9|CAA21673.1|  389|Caenorhabditis elegans Hypothetical
           protein Y51H1A.1a protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 30  GSAERKHKFCELKRKFYCIECSQSDQNV 113
           GS   K + C +  K+YC EC +S   V
Sbjct: 160 GSTFSKFETCAIDSKYYCTECMKSGGKV 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,011,266
Number of Sequences: 27780
Number of extensions: 164564
Number of successful extensions: 577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)