Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O09
         (450 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001509D49 Cluster: Endonuclease/Exonuclease/phospha...    34   1.6  
UniRef50_Q7RD01 Cluster: Sf-assemblin, putative; n=3; Plasmodium...    33   2.9  
UniRef50_Q04549 Cluster: Actin-like protein ARP10; n=2; Saccharo...    32   5.0  
UniRef50_Q4YWF0 Cluster: Putative uncharacterized protein; n=3; ...    31   8.8  
UniRef50_Q23Q76 Cluster: Adaptin N terminal region family protei...    31   8.8  

>UniRef50_UPI0001509D49 Cluster:
           Endonuclease/Exonuclease/phosphatase family protein;
           n=1; Tetrahymena thermophila SB210|Rep:
           Endonuclease/Exonuclease/phosphatase family protein -
           Tetrahymena thermophila SB210
          Length = 449

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
 Frame = +1

Query: 61  LCLDYYKNDEIYDLNGLLGTTY--AVYFWPPNQRQREDCEVINFKKLNSQEVYQAGNNCY 234
           LCL   + D +YDLN  L   +  +V      + +++ C  I FKK   +E+Y       
Sbjct: 94  LCLQETQLDTLYDLNDKLREIFDVSVIHRLKGKSKKDGCTTI-FKKEEYEEIYSV----- 147

Query: 235 RLNLSSEQSIVMGTYQE*YWENCQ----FTLL 318
           +L+L    SI    Y E  W NC+    FTLL
Sbjct: 148 KLDLDQSSSI----YSELQWINCENICLFTLL 175


>UniRef50_Q7RD01 Cluster: Sf-assemblin, putative; n=3; Plasmodium
           (Vinckeia)|Rep: Sf-assemblin, putative - Plasmodium
           yoelii yoelii
          Length = 613

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 43  IRNNEELCLDYYKNDEIYDLNGLLGTTYAV-YFWPPNQRQREDCEVINFKKLNSQEVYQ 216
           I  NEE C+D  +N+   +   +   TY +      N+++++D +  +F ++ S+ +Y+
Sbjct: 161 INRNEETCIDINRNNSKEENKDIYNNTYKIDSHIDENKKEKKDLKTHDFNEVPSKSIYE 219


>UniRef50_Q04549 Cluster: Actin-like protein ARP10; n=2;
           Saccharomyces cerevisiae|Rep: Actin-like protein ARP10 -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 284

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -3

Query: 82  FYNNPNIAPRYYEYNLRCKINKLK 11
           FYNNP+IAP +++Y  R  + +L+
Sbjct: 261 FYNNPHIAPDWFDYYFRTGVKRLQ 284


>UniRef50_Q4YWF0 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 396

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 19/85 (22%), Positives = 41/85 (48%)
 Frame = +1

Query: 1   QLLALVYLFCNVNCIRNNEELCLDYYKNDEIYDLNGLLGTTYAVYFWPPNQRQREDCEVI 180
           QL  L  +F N+N   NN  LC++ +KN    D   +   +++       + + E+   +
Sbjct: 191 QLNILAEIFANINISPNNHNLCVNEFKN--YNDGKEMFEISFSKKAVNSEKNEYEE-NYL 247

Query: 181 NFKKLNSQEVYQAGNNCYRLNLSSE 255
           N  +  +   Y+  +N Y +N++++
Sbjct: 248 NDIEQKATHTYKNDSNLYEININNK 272


>UniRef50_Q23Q76 Cluster: Adaptin N terminal region family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Adaptin N
           terminal region family protein - Tetrahymena thermophila
           SB210
          Length = 1273

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 112 LGTTYAVYFWPPNQRQREDCEVINFKKLNSQEVYQAGNNCY 234
           +GT  +VY+ PP Q  +   ++IN K++   E  +AG+  +
Sbjct: 798 IGTLSSVYYKPPEQFVKHLRDIINQKEMEENEAEEAGDEFF 838


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,845,122
Number of Sequences: 1657284
Number of extensions: 8601363
Number of successful extensions: 20793
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20791
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)