Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O07
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 270 3e-73
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 262 7e-71
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 256 6e-69
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 256 6e-69
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 255 1e-68
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 254 3e-68
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 181 2e-46
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 181 2e-46
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 130 4e-31
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 128 3e-30
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 128 3e-30
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 127 4e-30
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 126 1e-29
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 126 1e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 122 1e-28
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 121 3e-28
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 121 3e-28
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 121 3e-28
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 120 8e-28
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 120 8e-28
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 120 8e-28
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 120 8e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 113 9e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 107 4e-24
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 106 1e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 106 1e-23
U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type chlo... 29 1.9
U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type chlo... 29 1.9
AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type chlo... 29 1.9
AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride ... 29 1.9
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 4.3
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 270 bits (663), Expect = 3e-73
Identities = 119/128 (92%), Positives = 126/128 (98%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYVPRA LVDLE
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ESCDC
Sbjct: 70 PGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDC 129
Query: 362 LPGFQLTH 385
L GFQ+TH
Sbjct: 130 LQGFQMTH 137
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDRIM T+SVVPS
Sbjct: 152 ISKIREEYPDRIMMTFSVVPS 172
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 262 bits (643), Expect = 7e-71
Identities = 115/128 (89%), Positives = 122/128 (95%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLE
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+E CDC
Sbjct: 70 PGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDC 129
Query: 362 LPGFQLTH 385
L GFQLTH
Sbjct: 130 LQGFQLTH 137
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDRIM+++SVVPS
Sbjct: 152 ISKIREEYPDRIMSSFSVVPS 172
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 256 bits (627), Expect = 6e-69
Identities = 113/128 (88%), Positives = 121/128 (94%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLE
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DC
Sbjct: 70 PGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDC 129
Query: 362 LPGFQLTH 385
L GFQLTH
Sbjct: 130 LQGFQLTH 137
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDRIMNT+SVVPS
Sbjct: 152 ISKIREEYPDRIMNTFSVVPS 172
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 256 bits (627), Expect = 6e-69
Identities = 113/128 (88%), Positives = 121/128 (94%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLE
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DC
Sbjct: 70 PGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDC 129
Query: 362 LPGFQLTH 385
L GFQLTH
Sbjct: 130 LQGFQLTH 137
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDRIMNT+SVVPS
Sbjct: 152 ISKIREEYPDRIMNTFSVVPS 172
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 255 bits (624), Expect = 1e-68
Identities = 110/128 (85%), Positives = 121/128 (94%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLE
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDC
Sbjct: 70 PGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDC 129
Query: 362 LPGFQLTH 385
L GFQLTH
Sbjct: 130 LQGFQLTH 137
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREE+PDRIM+++SVVPS
Sbjct: 152 ISKIREEFPDRIMSSFSVVPS 172
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 254 bits (621), Expect = 3e-68
Identities = 109/128 (85%), Positives = 121/128 (94%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYVPRA+LVDLE
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDC
Sbjct: 70 PGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDC 129
Query: 362 LPGFQLTH 385
L GFQLTH
Sbjct: 130 LQGFQLTH 137
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDRIM+++SVVPS
Sbjct: 152 ISKIREEYPDRIMSSFSVVPS 172
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 181 bits (441), Expect = 2e-46
Identities = 79/128 (61%), Positives = 100/128 (78%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+
Sbjct: 10 GQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLD 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D
Sbjct: 70 PESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADS 129
Query: 362 LPGFQLTH 385
L GFQL H
Sbjct: 130 LEGFQLIH 137
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPSA 495
IS +REEY D+ ++T S++PSA
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSA 173
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 181 bits (441), Expect = 2e-46
Identities = 79/128 (61%), Positives = 100/128 (78%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+
Sbjct: 10 GQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLD 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D
Sbjct: 70 PESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADS 129
Query: 362 LPGFQLTH 385
L GFQL H
Sbjct: 130 LEGFQLIH 137
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPSA 495
IS +REEY D+ ++T S++PSA
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSA 173
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 130 bits (315), Expect = 4e-31
Identities = 57/129 (44%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYVPRAILVDL 178
GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+VPRAI VDL
Sbjct: 14 GQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDL 73
Query: 179 EPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCD 358
EP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +RK++E+C+
Sbjct: 74 EPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCE 133
Query: 359 CLPGFQLTH 385
L GF + H
Sbjct: 134 GLQGFLVFH 142
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 128 bits (308), Expect = 3e-30
Identities = 54/128 (42%), Positives = 80/128 (62%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 70 PTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 128 bits (308), Expect = 3e-30
Identities = 54/128 (42%), Positives = 80/128 (62%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 70 PTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 127 bits (307), Expect = 4e-30
Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVD 175
GQ G QIG WE+ EHGI P G D+ +E N +++E GK+VPRAI VD
Sbjct: 10 GQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D VR+ +E C
Sbjct: 70 LEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERC 129
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 130 QSLQGFLIFH 139
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 126 bits (303), Expect = 1e-29
Identities = 54/128 (42%), Positives = 81/128 (63%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 70 PTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 126 bits (303), Expect = 1e-29
Identities = 54/128 (42%), Positives = 81/128 (63%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +R+ +++C
Sbjct: 70 PTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 122 bits (294), Expect = 1e-28
Identities = 57/131 (43%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILV 172
GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK+VPR + V
Sbjct: 16 GQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFV 74
Query: 173 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 352
DLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D V++ +E+
Sbjct: 75 DLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAEN 134
Query: 353 CDCLPGFQLTH 385
C+ L GF + H
Sbjct: 135 CNGLQGFVIFH 145
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 121 bits (292), Expect = 3e-28
Identities = 51/128 (39%), Positives = 79/128 (61%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C
Sbjct: 70 PTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 121 bits (292), Expect = 3e-28
Identities = 51/128 (39%), Positives = 79/128 (61%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +R+ +++C
Sbjct: 70 PTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSG 129
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 130 LQGFFVFH 137
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 121 bits (291), Expect = 3e-28
Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G + + L ++ N +++E GK+VPRAI+VD
Sbjct: 15 GQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVD 74
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V+D VR+ E+C
Sbjct: 75 LEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENC 134
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 135 RGLQGFLVFH 144
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 120 bits (288), Expect = 8e-28
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVD 175
GQ G QIG WE+ EHGI P G D L + + +++E G++VPRA++VD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 130 TGLQGFLVFH 139
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 120 bits (288), Expect = 8e-28
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVD 175
GQ G QIG WE+ EHGI P G D L + + +++E G++VPRA++VD
Sbjct: 9 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVD 68
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 69 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 128
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 129 TGLQGFLVFH 138
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 120 bits (288), Expect = 8e-28
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVD 175
GQ G QIG WE+ EHGI P G D L + + +++E G++VPRA++VD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 130 TGLQGFLVFH 139
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 120 bits (288), Expect = 8e-28
Identities = 52/130 (40%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVD 175
GQ G QIG WE+ EHGI P G D L + + +++E G++VPRA++VD
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD +R+ +++C
Sbjct: 70 LEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNC 129
Query: 356 DCLPGFQLTH 385
L GF + H
Sbjct: 130 TGLQGFLVFH 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 113 bits (271), Expect = 9e-26
Identities = 50/128 (39%), Positives = 80/128 (62%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQ G QIG WE+ EHGI P G + D + ++++ G++VPR+I VDLE
Sbjct: 10 GQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLE 68
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
P +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +R+ + +C+
Sbjct: 69 PTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEG 128
Query: 362 LPGFQLTH 385
L GF + H
Sbjct: 129 LQGFFVFH 136
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 107 bits (257), Expect = 4e-24
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Frame = +2
Query: 53 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 223
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 224 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLPGFQLTH 385
+F P+ + G+ A N +A+G YT G E++D V+D V++ +E+C+ L GF + H
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 106 bits (254), Expect = 1e-23
Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLE
Sbjct: 13 GQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLE 71
Query: 182 PGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESES 352
P ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+E+
Sbjct: 72 PRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAEN 130
Query: 353 CDCLPGFQLTH 385
+ L G TH
Sbjct: 131 TNNLDGILFTH 141
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 106 bits (254), Expect = 1e-23
Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLE
Sbjct: 13 GQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLE 71
Query: 182 PGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESES 352
P ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++ +E+E+
Sbjct: 72 PRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAEN 130
Query: 353 CDCLPGFQLTH 385
+ L G TH
Sbjct: 131 TNNLDGILFTH 141
>U28943-17|AAK68292.2| 811|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform b protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 307 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 143
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 142 SGGLIVINIDALKLQV-RIAVVCTGGV 65
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U28943-16|AAK68291.1| 1001|Caenorhabditis elegans Clc-type
chloride channel protein3, isoform a protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 307 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 143
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 142 SGGLIVINIDALKLQV-RIAVVCTGGV 65
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF319614-1|AAG49524.1| 1001|Caenorhabditis elegans CLC-type
chloride channel CLH-3b protein.
Length = 1001
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 307 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 143
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 109 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 165
Query: 142 SGGLIVINIDALKLQV-RIAVVCTGGV 65
G V + Q+ R+ +GG+
Sbjct: 166 KEGPFVHVASVVASQLTRLVHGSSGGI 192
>AF173172-1|AAF13165.1| 811|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 811
Score = 29.1 bits (62), Expect = 1.9
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = -1
Query: 307 LSALCVVSLGPVVTGAGLSENK-----VVRAEYLSERSRTNRVHGAGLEVDEDGAGHVLA 143
LSA+C + P G+G+ E K V+ EYLS R+ +++ G L + G+G +
Sbjct: 180 LSAVCAHYIAPQAIGSGIPEMKTILRGVILKEYLSVRTLLSKMIGLTLSL---GSGLPMG 236
Query: 142 SGGLIVINIDALKLQV-RIAVVCTGGV 65
G V + Q+ R+ +GG+
Sbjct: 237 KEGPFVHVASVVASQLTRLVHGSSGGI 263
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 157 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 50
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 41 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 178
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,562,762
Number of Sequences: 27780
Number of extensions: 211863
Number of successful extensions: 768
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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