Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O07
(496 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 256 8e-69
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 252 1e-67
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 252 1e-67
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 250 3e-67
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 250 4e-67
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 250 4e-67
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 249 9e-67
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 248 2e-66
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 248 2e-66
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 124 3e-29
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 124 3e-29
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 123 8e-29
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 123 8e-29
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 122 1e-28
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 120 4e-28
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 120 4e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 105 2e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 105 2e-23
At1g49570.1 68414.m05558 peroxidase, putative identical to perox... 29 2.3
At5g43630.1 68418.m05333 zinc knuckle (CCHC-type) family protein... 28 3.0
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 28 3.0
At1g17210.1 68414.m02097 expressed protein distantly related to ... 28 3.0
At5g01050.1 68418.m00008 laccase family protein / diphenol oxida... 27 5.3
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 27 5.3
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 6.9
At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340... 27 9.2
At1g27595.1 68414.m03365 expressed protein similar to Symplekin ... 27 9.2
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 256 bits (626), Expect = 8e-69
Identities = 110/129 (85%), Positives = 124/129 (96%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDL 178
GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+YVPRA+L+DL
Sbjct: 10 GQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDL 69
Query: 179 EPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCD 358
EPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CD
Sbjct: 70 EPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 129
Query: 359 CLPGFQLTH 385
CL GFQ+ H
Sbjct: 130 CLQGFQVCH 138
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 153 ISKIREEYPDRMMLTFSVFPS 173
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 252 bits (617), Expect = 1e-67
Identities = 108/128 (84%), Positives = 122/128 (95%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YVPRAIL+DLE
Sbjct: 10 GQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDC
Sbjct: 70 PGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMLTFSVFPS 172
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 252 bits (617), Expect = 1e-67
Identities = 110/129 (85%), Positives = 122/129 (94%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDL 178
GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+YVPRA+L+DL
Sbjct: 10 GQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDL 69
Query: 179 EPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCD 358
EPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CD
Sbjct: 70 EPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCD 129
Query: 359 CLPGFQLTH 385
CL GFQ+ H
Sbjct: 130 CLQGFQVCH 138
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 153 ISKIREEYPDRMMLTFSVFPS 173
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 250 bits (613), Expect = 3e-67
Identities = 110/128 (85%), Positives = 120/128 (93%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYVPRA+L+DLE
Sbjct: 10 GQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDC
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMMTFSVFPS 172
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 250 bits (612), Expect = 4e-67
Identities = 108/128 (84%), Positives = 120/128 (93%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLE
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDC
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMLTFSVFPS 172
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 250 bits (612), Expect = 4e-67
Identities = 108/128 (84%), Positives = 120/128 (93%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLE
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDC
Sbjct: 70 PGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMLTFSVFPS 172
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 249 bits (609), Expect = 9e-67
Identities = 110/128 (85%), Positives = 120/128 (93%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYVPRA+L+DLE
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+ DC
Sbjct: 70 PGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMMTFSVFPS 172
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 248 bits (607), Expect = 2e-66
Identities = 107/128 (83%), Positives = 121/128 (94%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YVPRA+L+DLE
Sbjct: 10 GQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDC
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMMTFSVFPS 172
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 248 bits (606), Expect = 2e-66
Identities = 106/128 (82%), Positives = 120/128 (93%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++VPRA+L+DLE
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLE 69
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDC 361
PGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDC
Sbjct: 70 PGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDC 129
Query: 362 LPGFQLTH 385
L GFQ+ H
Sbjct: 130 LQGFQVCH 137
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1
Query: 430 ISXIREEYPDRIMNTYSVVPS 492
IS IREEYPDR+M T+SV PS
Sbjct: 152 ISKIREEYPDRMMLTFSVFPS 172
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 124 bits (299), Expect = 3e-29
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 124 bits (299), Expect = 3e-29
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 123 bits (296), Expect = 8e-29
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G GD + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 123 bits (296), Expect = 8e-29
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G GD + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 122 bits (294), Expect = 1e-28
Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G DS + + N +++E S G++VPRA+ +D
Sbjct: 10 GQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 120 bits (290), Expect = 4e-28
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G D + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 120 bits (290), Expect = 4e-28
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVD 175
GQ G Q+G WE+ EHGI P G D + + N +++E GK+VPRA+ VD
Sbjct: 10 GQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVD 69
Query: 176 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
LEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK +++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 356 DCLPGF 373
L GF
Sbjct: 130 TGLQGF 135
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 105 bits (252), Expect = 2e-23
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PRA+L+DLE
Sbjct: 11 GQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLE 70
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
P ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 71 PRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGS 129
Query: 356 DCLPGFQLTH 385
D L GF L H
Sbjct: 130 DSLEGFVLCH 139
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 105 bits (251), Expect = 2e-23
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 GQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLE 181
GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PRA+L+DLE
Sbjct: 11 GQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLE 70
Query: 182 PGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESESC 355
P ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E++
Sbjct: 71 PRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREADGS 129
Query: 356 DCLPGFQLTH 385
D L GF L H
Sbjct: 130 DSLEGFVLCH 139
>At1g49570.1 68414.m05558 peroxidase, putative identical to
peroxidase ATP5a [Arabidopsis thaliana]
gi|1546702|emb|CAA67341; similar to peroxidase
SWISS-PROT:P80679 from [Armoracia rusticana]
Length = 350
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 217 ERSRTNRVHGAGLEVDEDGAGHVLASGGLIVINIDALKLQVRIAVVCTGG 68
+ ++ NR G EV ED + +S L V D + L R AVV TGG
Sbjct: 111 KNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGG 160
>At5g43630.1 68418.m05333 zinc knuckle (CCHC-type) family protein
contains Pfam domain PF00098: Zinc knuckle
Length = 831
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 293 TEGAELVDSVLDVVRKESESCDCLPGFQLTHFSSEAVPAPVWAHYLSXRSVKS 451
TE +LV ++ +E S C+ FQL+H+++ AP++ R++K+
Sbjct: 623 TELRDLVQNISVRNGREEASSLCIRCFQLSHWAATCPNAPLYGSGAEGRAMKN 675
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 28.3 bits (60), Expect = 3.0
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -2
Query: 267 PAPDCPKTKLSGRNICPKGPERTESMVPG-SRSTRMARGT 151
PAP P L NICP G + M SRS + GT
Sbjct: 129 PAPTSPANVLPTGNICPSGKIQITGMTQSRSRSDVLGSGT 168
>At1g17210.1 68414.m02097 expressed protein distantly related to
dentin phosphoryn [Homo sapiens] (GI:4322670)
Length = 958
Score = 28.3 bits (60), Expect = 3.0
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Frame = -2
Query: 258 DCPK-TKLSGRNICPKGPERTESMV--PG------SRSTRMARGTY--LPPE 136
DC + + S RN CP GP R +S + PG S S+R A G Y L PE
Sbjct: 280 DCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSRKASGNYEVLGPE 331
>At5g01050.1 68418.m00008 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 586
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -2
Query: 189 VPGSRSTRMARGTYLPPEASL**TLMRSSCKSESPWYAPVGSMPCSSEMISQNLAPIWLP 10
VP S T+ RG + A+ SS PW P +P + S + + P
Sbjct: 289 VPASPDTKPTRGLIVYEGAT-------SSSSPTKPWMPPANDIPTAHRFSSNITSLVGGP 341
Query: 9 HW 4
HW
Sbjct: 342 HW 343
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 308 LVDSVLDVVRKESESCDCLPGFQLT-HFSSEAVPA 409
+++SV VVRKE+E+C+CL F ++ F ++V A
Sbjct: 1 MINSV-GVVRKEAENCNCLQVFFVSGSFKVDSVEA 34
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 23 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 172
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
>At5g58930.1 68418.m07382 expressed protein contains Pfam PF05340:
Protein of unknown function (DUF740)
Length = 521
Score = 26.6 bits (56), Expect = 9.2
Identities = 28/96 (29%), Positives = 41/96 (42%)
Frame = +2
Query: 65 DPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNF 244
+ G +HG L ER N S Y P + LE G+ V G++ + D F
Sbjct: 289 ETVGLFHGAKLLVTERELRDSNWYSIKNYKPES----LELGSK-GVGCVAAGEVKKQDGF 343
Query: 245 VFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 352
G +G NW+KG G L+ DV + E ++
Sbjct: 344 --GLKKSGKNWSKGWNFWG--LIQRKTDVAKNEMKT 375
>At1g27595.1 68414.m03365 expressed protein similar to Symplekin
(SP:Q92797) {Homo sapiens}
Length = 1091
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 75 PVGSMPCSSEMISQNLAPIW 16
PVG C SE ++Q L +W
Sbjct: 655 PVGKEVCDSERVTQGLGAVW 674
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,067,759
Number of Sequences: 28952
Number of extensions: 202511
Number of successful extensions: 665
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 868578304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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