Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O05
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    36   0.017
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    31   0.49 
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.      30   1.1  
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl...    30   1.1  
AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U13642-2|AAG00042.2|  430|Caenorhabditis elegans Abnormal growth...    29   2.0  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    29   2.0  
AY052773-1|AAL14112.1|  430|Caenorhabditis elegans tRNA isopente...    29   2.0  
AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical...    29   2.0  
AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical ...    29   2.0  
AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z72503-7|CAA96597.1|  424|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z81562-1|CAB04560.2|  367|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF106574-3|AAC78159.2|  427|Caenorhabditis elegans Hypothetical ...    27   8.1  

>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
           protein F46H5.4 protein.
          Length = 2018

 Score = 36.3 bits (80), Expect = 0.017
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
 Frame = +1

Query: 229 YDDMLRQVQDSTTDDDLLRISEEM--FNADIN-NAFNY-IQVSLQGKTSPMSKNDEASSN 396
           +   +RQ  D T+D+D+ RI  EM   N  ++   FN+ ++++L G           S+ 
Sbjct: 505 FSSFIRQEGDKTSDEDIYRICSEMRRTNGKVHKKMFNFELELTLAGSNKSKEYQSHGSNL 564

Query: 397 LLNVPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLM 573
            LN    +     I  + A  +  +KNVI   FV P        +IN    TG  R +M
Sbjct: 565 TLNSERVIHEAMEIPIYQASLNKSYKNVI---FVYPK-------HINLSNRTGNARNIM 613


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +1

Query: 247 QVQDSTTDDDLLRISEEMFNADI--NNAFNYIQVSLQGKTSPMSKNDEASSNLLN 405
           Q+++   + D +++S E  +  +  NN  +++ ++  G++SP+  ND+ S + LN
Sbjct: 343 QMEELLENQDFMKLSIEDLSTSLAMNNVLSFLSITFYGESSPL-PNDDISISFLN 396


>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
          Length = 1751

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 226  SYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVS 345
            +YDD+LR +++   DD+ L    +   A+++NA   +Q S
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQNS 1607


>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
            anchorage protein1 protein.
          Length = 8545

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 226  SYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVS 345
            +YDD+LR +++   DD+ L    +   A+++NA   +Q S
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQNS 1607


>AC024777-5|AAF60564.1|  506|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.1 protein.
          Length = 506

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 463 NYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTLMNFLVSKGLTQM 606
           +Y  + + P F   +  T  T+Y+N I    P+   M  L S G+TQ+
Sbjct: 426 SYVPSAVPPMFSATSAPTPPTSYVNPIPPPAPLNFPMPSLSSIGITQL 473


>Z83112-2|CAB05539.1|  391|Caenorhabditis elegans Hypothetical
           protein K02B7.2 protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 188 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 241

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 242 PKSKPMEKN 250


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 430 PTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYINTILATGPIRTL 570
           PT    VALFDN H+    PE+   N       +++  LA  P  T+
Sbjct: 327 PTRSKSVALFDNKHQMSSIPEYSMLNTNLANLEHLDLELANSPCTTV 373


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 124 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 210
           +S ++  Q GN+AQ  L  +GT+V   VD
Sbjct: 414 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 442


>U13642-2|AAG00042.2|  430|Caenorhabditis elegans Abnormal growth
           rate protein 1 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +1

Query: 178 QIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGK 357
           +I  +VGG   YA+   Y++ L +   S   D   R S E  + D         +S Q  
Sbjct: 110 KIPVIVGGTTYYAESVLYENNLIETNTSDDVDSKSRTSSESSSEDTEEG-----ISNQEL 164

Query: 358 TSPMSKNDEASSNLLNVPEN 417
              + K DE S+ LL+ P N
Sbjct: 165 WDELKKIDEKSALLLH-PNN 183


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 124 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 210
           +S ++  Q GN+AQ  L  +GT+V   VD
Sbjct: 396 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 424


>AY052773-1|AAL14112.1|  430|Caenorhabditis elegans tRNA isopentenyl
           transferase protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 24/80 (30%), Positives = 35/80 (43%)
 Frame = +1

Query: 178 QIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGK 357
           +I  +VGG   YA+   Y++ L +   S   D   R S E  + D         +S Q  
Sbjct: 110 KIPVIVGGTTYYAESVLYENNLIETNTSDDVDSKSRTSSESSSEDTEEG-----ISNQEL 164

Query: 358 TSPMSKNDEASSNLLNVPEN 417
              + K DE S+ LL+ P N
Sbjct: 165 WDELKKIDEKSALLLH-PNN 183


>AF125964-4|ABA03109.1|  414|Caenorhabditis elegans Hypothetical
           protein W03G1.3 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 206 PKSKPMEKN 214


>AF047655-3|ABD63244.1|  414|Caenorhabditis elegans Hypothetical
           protein C17B7.13 protein.
          Length = 414

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 206 PKSKPMEKN 214


>AF025465-11|AAB71024.1|  411|Caenorhabditis elegans Hypothetical
           protein K02E7.2 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 149 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 202

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 203 PKSKPMEKN 211


>AF016422-3|AAG24173.1|  411|Caenorhabditis elegans Hypothetical
           protein R09E12.5 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 149 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 202

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 203 PKSKPMEKN 211


>AC024831-4|ABD63212.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55F3C.11 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/69 (27%), Positives = 36/69 (52%)
 Frame = +1

Query: 172 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQ 351
           L+++G  VGG +DY+  +S D+++R   D+ +   +  I   M   ++       + S+ 
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205

Query: 352 GKTSPMSKN 378
            K+ PM KN
Sbjct: 206 PKSKPMEKN 214


>Z72503-7|CAA96597.1|  424|Caenorhabditis elegans Hypothetical
           protein C26C6.4a protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 283 RISEEMFNADINNAFNYIQVSLQGKTSP 366
           R+S+E+   DI+N +N++Q S Q K  P
Sbjct: 58  RVSKELSFEDIHNEYNFMQFSEQLKAMP 85


>Z81562-1|CAB04560.2|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.2 protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 549 GEYSVDVRCLLCFFVGRDEFWSDHIFMIVV 460
           G  S+ V C + +F+G   ++SDH+  + +
Sbjct: 13  GIESIRVFCAIAYFMGTFNYYSDHVHFVAL 42


>AF106574-3|AAC78159.2|  427|Caenorhabditis elegans Hypothetical
           protein E02D9.1a protein.
          Length = 427

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +1

Query: 220 KKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNL 399
           K  Y+D+   +      DD  + SE + N D N     I  ++       SKNDE+S N 
Sbjct: 99  KLKYNDVDGAILKVRGADDFEKFSERLENTDENEEIVLILENIS------SKNDESSGNS 152

Query: 400 LNV 408
            NV
Sbjct: 153 QNV 155


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.132    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,177,316
Number of Sequences: 27780
Number of extensions: 254943
Number of successful extensions: 960
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)