Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_O04
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 201 3e-52
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 201 3e-52
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 31 0.36
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8) 31 0.47
SB_2854| Best HMM Match : TUDOR (HMM E-Value=0.00033) 31 0.62
SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_44698| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002) 29 1.4
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_27819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_2522| Best HMM Match : TFIIB (HMM E-Value=0.0018) 28 3.3
SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014) 28 3.3
SB_17724| Best HMM Match : TFIIB (HMM E-Value=0.01) 28 3.3
SB_18905| Best HMM Match : Nop (HMM E-Value=0) 28 4.4
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 28 4.4
SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_53159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 5.8
SB_20503| Best HMM Match : TFIIB (HMM E-Value=0.00035) 27 5.8
SB_44565| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06) 27 5.8
SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22) 27 5.8
SB_23405| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 5.8
SB_16896| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 5.8
SB_55010| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_51702| Best HMM Match : SURF6 (HMM E-Value=4) 27 7.7
SB_44307| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38) 27 7.7
SB_14263| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 27 7.7
SB_49844| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_47897| Best HMM Match : DUF156 (HMM E-Value=2.9) 27 7.7
SB_31572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_13638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 201 bits (490), Expect = 3e-52
Identities = 100/133 (75%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Frame = +2
Query: 41 TPELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDP 220
TPEL+ EL++IA+AIVA GKGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 221 ALSENISGVILFHETLYQKTDDGTPLVSLLEKRGIIPGIKVDKGVVPLFGSE-DECTTQG 397
+S ISGVILFHET+YQK DDGTP V LL +GIIPGIKVDKGVV L G++ E TTQG
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 398 LDDLAQRCAQYKK 436
LD L +RCAQYKK
Sbjct: 126 LDGLGERCAQYKK 138
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 201 bits (490), Expect = 3e-52
Identities = 100/133 (75%), Positives = 112/133 (84%), Gaps = 1/133 (0%)
Frame = +2
Query: 41 TPELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDP 220
TPEL+ EL++IA+AIVA GKGILAADESTGTMGKRL +IGVENTEENRR YRQLLF+S
Sbjct: 6 TPELKAELKRIAEAIVADGKGILAADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGK 65
Query: 221 ALSENISGVILFHETLYQKTDDGTPLVSLLEKRGIIPGIKVDKGVVPLFGSE-DECTTQG 397
+S ISGVILFHET+YQK DDGTP V LL +GIIPGIKVDKGVV L G++ E TTQG
Sbjct: 66 EMSNAISGVILFHETVYQKADDGTPFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQG 125
Query: 398 LDDLAQRCAQYKK 436
LD L +RCAQYKK
Sbjct: 126 LDGLGERCAQYKK 138
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 35 YPTPELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEENRRKY 193
YP P + RK + + PGK L A S + R++ +++ ++ R KY
Sbjct: 303 YPDPSVAHRYRKQRRPVPVPGKRGLQATPSEELIIARIKRYAIDDRQKGRTKY 355
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 236 ISGVILFHETLYQKTDDGTPLVSLLEKR 319
+SG ++ +E L+Q DD TPLV +L +R
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8)
Length = 441
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 366 NRGTTPLSTLIPGMMPRFSRRDTRGVPSSVFWYRVSWKRITPEMFSESAGS 214
++ T+P++ I P F RR++ VPS V R S +P+ + S GS
Sbjct: 243 SKNTSPIAVTIRQYSPNFGRRNSDHVPSQVDSSRKSVVSFSPDSANGSDGS 293
>SB_2854| Best HMM Match : TUDOR (HMM E-Value=0.00033)
Length = 359
Score = 30.7 bits (66), Expect = 0.62
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3
Query: 195 RYLRRFSSVFSTPMSWRRL---PIVPVDSSAARIPFPGATIAWAIFLSSSCSSGVG 37
R+L F ++ T ++L P+ +S + ATIAWAI+L + +SG G
Sbjct: 66 RHLLSFKAILLTTFHTKKLFTRPLSEQPNSELTKSYEQATIAWAIYLYTPGASGTG 121
>SB_56271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 30.3 bits (65), Expect = 0.82
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 38 PTPELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEENRRKY 193
P P + K Q + PGK L A S + R++ V++ ++ R KY
Sbjct: 695 PDPSVAHRYHKQGQPVPVPGKRELQATPSKELITARIKRYAVDDRQKGRTKY 746
>SB_44698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 65 RKIAQAIVAPGKGILAADESTGTMGKRLQDIGVE 166
R Q +V PG + D + G +GKRL ++ VE
Sbjct: 75 RPFIQRLVLPGGHVRLQDSNYGKIGKRLYELAVE 108
>SB_12185| Best HMM Match : AAA_5 (HMM E-Value=0.002)
Length = 3616
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +2
Query: 47 ELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDPAL 226
E+Q+ L K AQ +V+ KG+ D + + K + +N E++R + + S D +
Sbjct: 1006 EIQQGLNKAAQCVVSVSKGVSQWDRTCRALRKAEKRDDSDN-EDSRSRSASNVGSDDESR 1064
Query: 227 SENISGVILFHETLYQKTDDGTPLVSL 307
SE + TDD + +VS+
Sbjct: 1065 SE----AAPTRRSARMPTDDASTVVSM 1087
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = -3
Query: 291 VPSSVFWYRVSWKRITPEMFSESAGSEL--NRS*RYLRRFSSVFSTPMSWRRLPIVPVDS 118
+P+S +WY ++ I +GS L + L +F+TP SW + I D+
Sbjct: 642 IPTSYYWYFLA---IQNNHIMGGSGSPLLQTQGPYQLIDLGYLFTTPQSWAQAEIASEDA 698
Query: 117 SAARI-PFPGATIAWAIFLSSS 55
I PG TI + L +S
Sbjct: 699 LLDPIASLPGLTIGMKVKLDAS 720
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 252 SSTKPCTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCS-DLKTSAPLKVSMTWPS-VAL 425
S K ++ ++LP+ +S + PVS +++ P S KT +P+ ++ P V+L
Sbjct: 1029 SGCKNPKKKNTLKLPVPVSLTSKTPGPVSLTSKTPGPVSLTSKTPSPVSLTSKTPGPVSL 1088
Query: 426 STRKDG 443
S++ G
Sbjct: 1089 SSKTSG 1094
>SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 236 ISGVILFHETLYQKTDDGTPLVSLLEKR 319
+SG ++ +E YQ DD TP V +L +R
Sbjct: 27 LSGSVVSNEWWYQLMDDSTPSVQILAER 54
>SB_27819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 236 ISGVILFHETLYQKTDDGTPLVSLLEKR 319
+SG ++ +E YQ DD TP V +L +R
Sbjct: 152 LSGSVVSNEWWYQLMDDSTPSVQILAER 179
>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 235 VLRECRVRTEQELTVFTAILLSVFDSNVLETLAHCTSG 122
V + C R + + V A++ VFD +V+E HC G
Sbjct: 332 VEKPCHCRDGESVQVNNAMVNVVFDGDVVEKPRHCRDG 369
>SB_2522| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 367
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 313 ARPQSFAVALTYYWVRLKGVNITLKKFSERTGVSELTIS-RKAREVATVLGTP 364
>SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014)
Length = 406
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +2
Query: 305 LLEKRGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKGRLALCQ 457
L K + P I + G+ CT D QRC + K GRL CQ
Sbjct: 93 LSSKTRVCPRIHYSALARLIIGAMPSCTKPSRDQCGQRC-ECKDGRLHRCQ 142
>SB_17724| Best HMM Match : TFIIB (HMM E-Value=0.01)
Length = 308
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 254 ARPQSFAVALTYYWVRLKGVNITLKKFSERTGVSELTIS-RKAREVATVLGTP 305
>SB_18905| Best HMM Match : Nop (HMM E-Value=0)
Length = 194
Score = 27.9 bits (59), Expect = 4.4
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +2
Query: 5 LKSTMSTYFQYPTPELQEELRKIAQAIVAPGKGILAA-----DEST-GTMGKRLQD 154
L T YF + +++RK A IVA K LAA EST GT+GKRLQ+
Sbjct: 104 LPHTGFIYFSPIVQNMPQDMRKKAARIVA-AKCTLAARVDSFHESTEGTIGKRLQE 158
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 27.9 bits (59), Expect = 4.4
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +2
Query: 2 KLKSTMSTYFQYPTPELQEELRKIAQAIVAPGKGILAADESTGTMGKRLQDIGVENTEEN 181
+L+ M + Q P+ EEL+++ Q + A G G + +E M K++Q E E
Sbjct: 21 ELEVVMKSLGQNPS---DEELQQMIQEVDADGNGEVDFEEFLAMMKKQMQHRDAE--AEM 75
Query: 182 RRKYRQLLFSSDPALSE 232
R +R + D ++SE
Sbjct: 76 REAFRVFDRNGDGSISE 92
>SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 1205 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 1256
>SB_53159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1540
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 297 RGVPSS-VFWYRVSWKRITPEMFSESAGSEL 208
RGVPS+ + WY+ + IT E+ S GS+L
Sbjct: 23 RGVPSAHITWYKPGGQPITAEVKLISGGSQL 53
>SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 412
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 358 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 409
>SB_20503| Best HMM Match : TFIIB (HMM E-Value=0.00035)
Length = 308
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 254 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 305
>SB_44565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 455 GKVPAVLSCTERNAGPSHRDLEWCTRLQIRTGGQ 354
GKV AV A P+ R E C RL I G Q
Sbjct: 51 GKVAAVEQLLNHGAEPNRRSHEECFRLLISRGAQ 84
>SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06)
Length = 1035
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 981 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 1032
>SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22)
Length = 224
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 221
>SB_23405| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 224
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 221
>SB_16896| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 224
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 312 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 157
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGISELTIS-RKAREVATVLGTP 221
>SB_55010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 267 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 398
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 38 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 81
>SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 236 ISGVILFHETLYQKTDDGTPLVSLLEKR 319
+SG ++ +E +Q DD TP V +L +R
Sbjct: 606 LSGSVISNEWWHQLMDDSTPSVQILSER 633
>SB_51702| Best HMM Match : SURF6 (HMM E-Value=4)
Length = 260
Score = 27.1 bits (57), Expect = 7.7
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +2
Query: 119 ESTGTMGKRLQDIGVENT-EENRRKYRQLLFSSDPALSENI---SGVILFHE-TLYQKTD 283
E TGT +QD G NT + ++ + + + S LS + GV++ E + QK D
Sbjct: 111 EGTGTDASEMQDSGAVNTCQSDKHVFTKHVAESKVVLSPSSHGKQGVLMMPEYVVGQKPD 170
Query: 284 DGTPLVSLLEKRGIIPGIKVDKGVVPLFGSEDE 382
V+ E +G + + G+ L ++E
Sbjct: 171 KQKKKVTRDESQGSVKSQEKTVGITHLQVEQEE 203
>SB_44307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 267 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 398
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 23 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 66
>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
Length = 761
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 272 QKTDDGTPLVSLLEKRGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 415
+K DD +S E ++P K G+ CT +G+D L Q
Sbjct: 202 KKFDDNIIDLSFTEDLDVLPKTKSKGSYCSCEGNNTRCTNEGIDRLEQ 249
>SB_14263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 267 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 398
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 55 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 98
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 320 GIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKGRLAL 451
G GI + KGV+ LFG + +G D+ QR K R ++
Sbjct: 31 GCTNGISILKGVLDLFGKKSNTIDEG--DITQRTLNTHKPRKSI 72
>SB_49844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 123 PLVQWASVSRTLESKTLRRIAVNTVNS 203
P+V W++V R ES AVN+V+S
Sbjct: 1 PVVDWSAVERMRESVISNMAAVNSVSS 27
>SB_47897| Best HMM Match : DUF156 (HMM E-Value=2.9)
Length = 430
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 462 ATWQSASRPFLY*AQRWA 409
+ W++ RPFLY RWA
Sbjct: 275 SAWRTGKRPFLYRGGRWA 292
>SB_31572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 456 WQSASRPFLY*AQRWAKSSRP*VVHSSS 373
W++ RPFLY RWA VH ++
Sbjct: 192 WRAGKRPFLYRGGRWAGHGGAGGVHEAA 219
>SB_13638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 267 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 398
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 26 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,794,517
Number of Sequences: 59808
Number of extensions: 408315
Number of successful extensions: 1485
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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