Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O02
         (64 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   4.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   4.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   5.5  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    18   9.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    18   9.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 40   QFSEGGGG 63
            Q SEGGGG
Sbjct: 1701 QLSEGGGG 1708


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 40   QFSEGGGG 63
            Q SEGGGG
Sbjct: 1697 QLSEGGGG 1704


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 64  IPPPPP 47
           +PPPPP
Sbjct: 375 LPPPPP 380


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 61   PPPPPK 44
            PPPPP+
Sbjct: 1860 PPPPPR 1865



 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61   PPPPP 47
            PPPPP
Sbjct: 1859 PPPPP 1863


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61  PPPPP 47
           PPPPP
Sbjct: 343 PPPPP 347



 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61  PPPPP 47
           PPPPP
Sbjct: 344 PPPPP 348


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61   PPPPP 47
            PPPPP
Sbjct: 1355 PPPPP 1359



 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61   PPPPP 47
            PPPPP
Sbjct: 1356 PPPPP 1360



 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61   PPPPP 47
            PPPPP
Sbjct: 1357 PPPPP 1361



 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -1

Query: 61   PPPPP 47
            PPPPP
Sbjct: 1358 PPPPP 1362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,494
Number of Sequences: 438
Number of extensions: 109
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 2
effective length of database: 145,467
effective search space used:  2618406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)