Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_O01
         (549 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   134   3e-32
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    80   1e-15
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    29   2.9  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  134 bits (325), Expect = 3e-32
 Identities = 73/169 (43%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
 Frame = +2

Query: 44  LGDVKTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL-PHVLRWYSHIAS 220
           + DVK+  GL   N  LAE+++ +G+  S  D ++F  +G  P AS  P+V RWY+++AS
Sbjct: 2   VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61

Query: 221 YTPAERKTWSEGVSXXXXXXXXXXXXXXSNXXXXXXXXLFGSGXXXXXXXXXXXXXXXLK 400
           YT AERKTW+                            LFGS                L 
Sbjct: 62  YTDAERKTWASAGGSAPAAAAADGDDFD----------LFGSDDEEEDAEKAKIVEERLA 111

Query: 401 AYADXKSKKPALIAKSSIILDVKPWDDETDMKEMENQVRTIEMDGLLWG 547
           AYA+ K+KK   IAKSS+ILDVKPWDDETD+ EME  VR+IEMDGL+WG
Sbjct: 112 AYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWG 160


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 40/71 (56%), Positives = 45/71 (63%)
 Frame = +2

Query: 335 LFGSGXXXXXXXXXXXXXXXLKAYADXKSKKPALIAKSSIILDVKPWDDETDMKEMENQV 514
           LFGS                L AYA  K+ K   IAKSS+ILDVKPWDDETD+ EME  V
Sbjct: 140 LFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLV 199

Query: 515 RTIEMDGLLWG 547
           R+IEMDGL+WG
Sbjct: 200 RSIEMDGLVWG 210


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 68  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 175
           G+N+LNQ L + +Y +G+  +++ I      GK+ A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 68  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 175
           G+N+LNQ L + +Y +G+  +++ +      GK+ A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,807,481
Number of Sequences: 27780
Number of extensions: 186821
Number of successful extensions: 487
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)